Job Description P13009 Confidence 83.29% Date Thu Jan 5 11:33:23 GMT 2012 Rank 129 Aligned Residues 185 % Identity 14% Template d1gzga_ SCOP info TIM beta/alpha-barrel Aldolase 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) Resolution 1.66

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	F	A	A	A	K	L	A	R	A	C	A	D	E	W	T	A	R	T	P	E	K	P	R	Y	V	A	G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																											.
Template Conservation														.	.	.	.	.	.	.	.	.																											.
Template Sequence		I	A	Q	R	A	T	R	A	L	R	E	R	.	.	.	.	.	.	.	.	.	F	P	E	L	G	I	I	T	D	V	A	L	D	P	F	T	T	H	G	Q	N	G	I	L	D	D	.	D	G	Y	V	L	N	D	V	S	I	D	V	L	V	R	Q	A	L	S	H	A	E	A	G	A	Q	V	V	A	P	S	D
Template Known Secondary structure														.	.	.	.	.	.	.	.	.		T	T	S								S	T	T	T	B	T	T			S	S		B		T	.	T	S		B																				T		S						S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220																								.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence							.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation							.	.	.	.	.
Template Sequence		M	M	D	G	R	.	.	.	.	.	I	G	A	I	R	E	A	L	E	S	A	G	H	T	N	V	R	V	M	A	Y	S	A	K	Y	A	S	A	Y	Y	G	P	F	R	D	A	V	G	S	A	S	N	L	G	K	G	N	K	A	T	Y	Q	M	D	P	A	N	S	D	E	A	L	H	E	V	A	A	D	L	A
Template Known Secondary structure				T	T		.	.	.	.	.											T	T		T	T										B			G	G	G								T						T	T				T	T	T	S	B		T	T		S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		177	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
			239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure		.																																							.	.	.	.	.
Query SS confidence		.																																							.	.	.	.	.
Query Sequence		.	E	A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	.	.	.	.	.	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V
Query Conservation		.																																							.	.	.	.	.
Alig confidence		.												.	.	.																									.	.	.	.	.												.													.
Template Conservation														.	.	.																																									.													.
Template Sequence		E	G	A	D	M	V	M	V	K	P	G	M	.	.	.	P	Y	L	D	I	V	R	R	V	K	D	E	F	R	A	P	T	F	V	Y	Q	V	S	G	E	Y	A	M	H	M	G	A	I	Q	N	G	W	L	A	E	.	S	V	I	L	E	S	L	T	A	F	K	R	.	A	G	A	D	G	I
Template Known Secondary structure		T	T		S						S	S	G	.	.	.	G	G													S																				T	T	S	S		T	.	T												.		T		S
Template Predicted Secondary structure														.	.	.																																									.													.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions