Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence26.56%DateThu Jan 5 11:33:23 GMT 2012
Rank439Aligned Residues133
% Identity17%Templated1d8wa_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like L-rhamnose isomerase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   406...410.........420.........430.........440.........450.........460.........470.........480.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  MLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAF
Query Conservation    
    
                

 



   






   

 





 




       
 







 
  
Alig confidence 










..........









.














.......

























Template Conservation 


 
     
..........    

   
. 

  
 

 


 
.......

  
   
      
      
 

Template Sequence  GIDVEEALRQL. . . . . . . . . . DRLPVSXHCW. QGDDVSGFENYPGKA. . . . . . . RNASELRADLEQAXRLIPGPKRLNLH
Template Known Secondary structure  T

..........TT

GG.GGTTT





S


.......
STS
S
Template Predicted Secondary structure 


..........







.














.......









Template SS confidence 















































































   28.30........ .40........ .50.........60... ......70.........80.........
 
   486...490........ .500.........510.........520...... ...530.........540.........
Predicted Secondary structure  ...







..







.........





..
Query SS confidence  . . .












. .



























. . . . . . . . .






















. .
Query Sequence  . . . DEQGQADTRARKI. . EICRRAYKILTEEVGFPPEDIIFDPNIF. . . . . . . . . AVATGIEEHNNYAQDFIGACEDI. .
Query Conservation  ...

 
 
 
 
 
 .. 

 
         
    




 
  .........

 

 

    
  

 


 
..
Alig confidence  ...




.






..









.







...





.........






















..
Template Conservation    
     . 

 
 
 

 
      
.   




... 


 

 
 
  
 





  

  

 
 
 
  
  
Template Sequence  AIYLESDT. PVSRDQIKPEHFKNWVEWA. KANQLGLD. . . FNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSA
Template Known Secondary structure  GGG


SS.


GGG

GGGG.TT
...


SSSGGGTTS
STT
SS
Template Predicted Secondary structure 




.




.


...
















Template SS confidence 















































































   104.....110. ........120.........130 ........ .140.........150.........160.........170........
 
   550.........560..
Predicted Secondary structure  ..



Query SS confidence  . .












Query Sequence  . . KRELPHALISGGV
Query Conservation  ..
  

   
 


Alig confidence  ..



.







Template Conservation    
  
.
   
 

Template Sequence  YFGEQL. GTPSVXNI
Template Known Secondary structure  .TS
Template Predicted Secondary structure 
.




Template SS confidence 














   179180.... .....190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions