Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence99.78%DateThu Jan 5 11:33:23 GMT 2012
Rank33Aligned Residues106
% Identity22%Templated1ccwa_
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   745....750.........760.........770.........780.........790.........800.........810.........820....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQ
Query Conservation   

 

















  

 



 




  

 
 

  
 
  

 







 
   
      
   
Alig confidence 















































































Template Conservation   
  

      
 
 

   
   
   
  
  

     
           
 
 

            

  

  
Template Sequence  EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEA
Template Known Secondary structure 


TT



TT

T
S
SSTTTT
Template Predicted Secondary structure 


























Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   825. ...830.........840.........850
Predicted Secondary structure 

.












Query SS confidence 

.























Query Sequence  GF. TIPLLIGGATTSKAHTAVKIEQNY
Query Conservation 
 .  






  
           
Alig confidence 

.























Template Conservation        
 


               
Template Sequence  GLEGILLYVGGNIVVGKQHWPDVEKRF
Template Known Secondary structure  T
TT
S
SSSS

Template Predicted Secondary structure 













Template SS confidence 


























   82.......90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions