Job Description P13009 Confidence 96.26% Date Thu Jan 5 11:33:23 GMT 2012 Rank 46 Aligned Residues 223 % Identity 15% Template c3s5oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate Resolution 1.97 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	.	.	.	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L
Query Conservation																																																					.	.	.
Alig confidence														.	.	.	.	.	.	.	.							.	.	.	.																						.	.	.
Template Conservation														.	.	.	.	.	.	.	.							.	.	.	.
Template Sequence		G	I	Y	P	P	V	T	T	P	F	T	A	.	.	.	.	.	.	.	.	T	A	E	V	D	Y	.	.	.	.	G	K	L	E	E	N	L	H	K	L	G	T	F	P	F	R	G	F	V	V	Q	G	S	N	G	E	F	P	F	L	T	S	S	E	R	L	E	V	V	S	R	V	R	Q	A	M	P	K	N	R
Template Known Secondary structure						B					B		T	.	.	.	.	.	.	.	.	T	S		B			.	.	.	.											T	T	S			S					S	S	G	G	G	T	G	G	G	S															T	S		T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.							.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	.	.	.	.	.	.	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F
Query Conservation																																										.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																					.	.	.	.	.	.																															.	.	.	.
Template Conservation															.	.	.	.	.	.	.																																																									.	.	.	.
Template Sequence		L	L	L	A	G	S	G	C	E	S	T	Q	A	.	.	.	.	.	.	.	T	V	E	M	T	V	S	M	A	Q	V	G	A	D	A	A	M	V	V	T	P	C	Y	Y	R	G	R	M	S	S	A	A	L	I	H	H	Y	T	K	V	A	D	L	S	P	I	P	V	V	L	Y	S	V	P	A	N	.	.	.	.
Template Known Secondary structure										S	S				.	.	.	.	.	.	.											T	T		S									T	T	G	G	G																		S	S											.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.																																																									.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E
Query Conservation
Alig confidence																.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		T	G	L	D	L	P	V	D	A	V	V	T	L	S	.	.	.	.	.	.	Q	H	P	N	I	V	G	M	D	S	G	G	D	V	T	R	I	G	L	I	V	H	K	T	R	.	.	.	.	.	.	.	K	Q	D	F	Q	V	L	A	G	S	A	G	F	L	M	A	S	Y	A	L	G	A	V	G	G	V	C	A
Template Known Secondary structure			S													.	.	.	.	.	.	T	S	T	T							S													T	T	.	.	.	.	.	.	.	T	S	S		B			B	S	S	G	G	G								T							G
Template Predicted Secondary structure																.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		362	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		R	T	N	V	.	.	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		L	A	N	V	L	G	A	Q	V	C	Q	L	E	R	L	C	C	T	G	Q	W	E	D	A	Q	K	L	Q	H	R
Template Known Secondary structure		G	G	G	T														T	T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions