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Job DescriptionP13009
Confidence96.26%DateThu Jan 5 11:33:23 GMT 2012
Rank46Aligned Residues223
% Identity15%Templatec3s5oA_
PDB info PDB header:lyaseChain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate
Resolution1.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140.........150.........160.........170.........180. ........190.........200.......
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Query Sequence  GVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIE. . . TVFDTLNAKAAVFAVKTEFEALGVEL
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Template Sequence  GIYPPVTTPFTA. . . . . . . . TAEVDY. . . . GKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNR
Template Known Secondary structure 
B



B
T........TS
B
....TTS

SSSGGGTGGGS
TS
TTS
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   37..40........ .50.... .....60.........70.........80.........90.........100....
 
   208.210.........220.........230.........240....... ..250.........260.........270.........280.
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Query Sequence  PIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLNC. . . . . . ALGPDELRQYVQELSRIAECYVTAHPNAGLPNAF
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Template Sequence  LLLAGSGCESTQA. . . . . . . TVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPAN. . . .
Template Known Secondary structure 


SS.......TT
S


TTGGG


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   105....110....... ..120.........130.........140.........150.........160.........170...
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  GEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVGE
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Template Sequence  TGLDLPVDAVVTLS. . . . . . QHPNIVGMDSGGDVTRIGLIVHKTR. . . . . . . KQDFQVLAGSAGFLMASYALGAVGGVCA
Template Known Secondary structure  S



......TSTT


S

TT.......TSS
B

BSSGGGT


G
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   174.....180....... ..190.........200.........210.. .......220.........230.........240
 
   362... ....370.........380.........
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Query Sequence  RTNV. . TGSAKFKRLIKEEKYSEALDVARQ
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Template Sequence  LANVLGAQVCQLERLCCTGQWEDAQKLQHR
Template Known Secondary structure  GGGT
TT
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   242.......250.........260.........270.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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