Phyre 2 alignment of P13009 with c3rxyA

Job Description P13009
Confidence 39.95% Date Thu Jan 5 11:33:23 GMT 2012

Rank 319 Aligned Residues 55

% Identity 22% Template c3rxyA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nif3 protein; PDBTitle: crystal structure of nif3 superfamily protein from sphaerobacter2 thermophilus

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1153	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.			.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence	E	L	L	E	V	E	K	H	T	G	M	K	L	T	E	S	F	A	M	W	P	G	A	S	V	S	G	W	Y	F	S	H	P	D	.	.	S	K	Y	Y	A	V	A	Q	I	Q	R	D	Q	V	E	D	Y	A	R	R	K	G	M	S	V	T	E	V	E	R	W	L	A	P	N	L	G
Query Conservation																																			.	.
Alig confidence								.						.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.														.
Template Conservation								.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence	E	L	L	L	A	R	Q	.	L	G	C	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	A	H	H	P	A	G	G	S	A	T	L	N	F	P	E	V	L	T	R	H	.	V	E	L	X	V	E	H	G	V	P	A	T	A	A	R	D	A	I	Q	G	L	L	T
Template Known Secondary structure								.	T	T		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S							G	G	G	G	G	G			.							T	T
Template Predicted Secondary structure								.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
	48	.	50	.	.	.	.		.	.	.	.	.															60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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