Job Description P13009 Confidence 62.51% Date Thu Jan 5 11:33:23 GMT 2012 Rank 211 Aligned Residues 185 % Identity 16% Template c3rpdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:methionine synthase (b12-independent); PDBTitle: the structure of a b12-independent methionine synthase from shewanella2 sp. w3-18-1 in complex with selenomethionine. Resolution 1.50 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		G	P	X	T	X	I	D	T	L	Y	D	D	H	Y	K	S	R	.	.	E	K	L	A	W	E	F	A	K	I	L	N	E	E	A	K	E	L	E	A	A	G	V	D	I	I	Q	F	D	E	P	A	F	N	V	F	F	D	E	V	N	D	W	G	I	A	C	L	E	R	A	I	E	G	L	K	C	E	T	A	V
Template Known Secondary structure								T	T	S			S	S					.	.																					T	T		S							G	G	G	G	T								T										T	T			S
Template Predicted Secondary structure																			.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		214	.	.	.	.											.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	T	D	A	.	.	.	.	.	.	.	.	.	.	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																																				.	.	.	.															.	.	.	.
Template Conservation																																																				.	.	.	.															.	.	.	.
Template Sequence		H	I	C	Y	G	Y	G	I	K	A	N	T	D	W	K	K	T	L	G	S	E	W	R	Q	Y	E	E	V	F	P	K	L	Q	K	S	N	I	D	I	I	S	L	E	C	H	N	S	H	V	P	.	.	.	.	X	E	L	L	E	L	I	R	G	K	K	V	X	V	.	.	.	.	G	A	I	D	V	A	T	D
Template Known Secondary structure					S			S	S								T	T	S		S				G	G	G	G	T							S	S									T	T					.	.	.	.	G	G	G	G	G	G	G	T	T	S					.	.	.	.			S		T	T
Template Predicted Secondary structure																																																				.	.	.	.															.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	.	.	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		T	I	E	T	A	E	E	V	A	D	T	L	R	K	A	L	K	F	V	D	A	D	K	L	Y	P	C	T	N	C	G	X	T	P	L	S	H	Q	V	T	R	G	K	L	N	A	L
Template Known Secondary structure		S																T	T	S		G	G	G						S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions