Job Description P13009 Confidence 62.83% Date Thu Jan 5 11:33:23 GMT 2012 Rank 209 Aligned Residues 198 % Identity 10% Template c3pdiG_ PDB info PDB header:protein binding Chain: G: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nife; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	M	M	V	C	S	K	A	M	L	N	V	A	R	K	L	Q	E	T	Y	G	T	P	W	F	E	G	S	.	.	.	.	.	.	.	.	.	.	.	F	Y	G	I	T	D	T	S	Q	A	L	R	D	F	A	R	L	L	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D
Template Known Secondary structure							S			T	T																				.	.	.	.	.	.	.	.	.	.	.	S	S	S															T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.												.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																			.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	D	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	R	T	E	A	L	I	A	R	E	E	A	K	V	R	A	A	L	E	P	W	R	A	R	L	E	G	K	R	V	L	L	Y	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	S	W	S	V	V	S	A	L	Q	D	L	G	M	K	V	V	A	T	G	T	K	K
Template Known Secondary structure																													T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													T								B	S	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	E	E	D	K	A	R	I	R	E	L	.	.	.	.	.	.	.	.	.	M	G	D	D	V	K	M	L	D	E	G	N	A	R	V	L	L	K	T	V	D	E	Y	Q	A	D	I	L	I	A	G	G	R	N	M	.	.	.	.	.	.	.	.	.	.	Y	T	A	L	K	G	R	V	P	F	L	D	I	N
Template Known Secondary structure		S												.	.	.	.	.	.	.	.	.	S		S	S			B			S		S											T	T		S						G	G	G		.	.	.	.	.	.	.	.	.	.						T	T			B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.										370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.											.	.	.	.	.	410	.	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	R	E	F	G	Y	A	G	Y	D	G	M	L	E	L	V	R	Q	L	C	I	T	L
Template Known Secondary structure		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions