Job Description P13009 Confidence 36.60% Date Thu Jan 5 11:33:23 GMT 2012 Rank 342 Aligned Residues 81 % Identity 15% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.				.	.	.	.	.	.	.	840
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		N	I	V	G	V	V	L	Q	C	N	N	Y	E	I	V	D	L	G	V	M	V	P	A	E	K	I	L	R	T	A	K	E	V	N	A	D	L	I	G	L	S	G	L	I	T	P	S	L	D	E	M	V	N	V	A	K	E	M	E	R	Q	G	F	T	I	P	L	L	I	.	.	.	G	G	A	T	T	S	K	A
Query Conservation																																																																							.	.	.
Alig confidence																				.	.	.																													.	.											.								.	.	.
Template Conservation																				.	.	.																													.	.											.
Template Sequence		E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	.	.	.	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	.	.	I	D	V	C	R	V	L	R	A	D	.	S	G	V	P	I	V	M	L	T	A	K	T	D	T	V	D	V	V
Template Known Secondary structure											T	T								.	.	.		G	G	G											S						S	S		S	S	S			.	.											.											T	T		S	S
Template Predicted Secondary structure																				.	.	.																													.	.											.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		841	.	.	.	.	.	.	.	.	850
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	A	V	K	I	E	Q	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	E	S	G	A	D	D	Y
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions