Job Description P13009 Confidence 94.85% Date Thu Jan 5 11:33:23 GMT 2012 Rank 63 Aligned Residues 167 % Identity 16% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																							.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.
Query Sequence		Y	V	A	G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	.	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E
Query Conservation																																																							.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																					.	.	.	.	.	.																				.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																														.	.
Template Sequence		I	I	G	Y	T	I	T	P	F	A	A	.	.	.	.	.	.	.	.	.	.	.	.	D	G	G	L	D	L	.	.	.	.	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	.	.
Template Known Secondary structure										B		T	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	B			.	.	.	.													T	T		S					S	S	G	G	G	T	G	G	G	S																.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																														.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.													.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	.	.	.	.	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L
Query Conservation																																																.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.																					.	.	.	.
Template Conservation		.																			.	.	.	.	.	.	.
Template Sequence		.	V	A	H	R	V	P	T	I	V	S	V	S	D	L	T	T	A	K	.	.	.	.	.	.	.	T	V	R	R	A	Q	F	A	E	S	L	G	A	E	A	V	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T
Template Known Secondary structure		.		T	T	S	S		B							S	S				.	.	.	.	.	.	.											T	T		S									S	S																			S	S
Template Predicted Secondary structure		.																			.	.	.	.	.	.	.
Template SS confidence
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L
Query Conservation
Alig confidence		.	.	.	.																										.	.	.	.
Template Conservation		.	.	.	.																										.	.	.	.
Template Sequence		.	.	.	.	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	K	E	.	.	.	.	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G	R
Template Known Secondary structure		.	.	.	.		S															S	T	T							.	.	.	.		S	S												T	T	T
Template Predicted Secondary structure		.	.	.	.																										.	.	.	.
Template SS confidence
						162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions