Job Description P13009 Confidence 68.42% Date Thu Jan 5 11:33:23 GMT 2012 Rank 181 Aligned Residues 221 % Identity 14% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		E	V	I	A	A	I	H	N	A	Y	F	E	A	G	A	D	I	I	E	T	N	T	F	N	S	T	T	I	A	M	A	D	Y	Q	.	.	.	.	M	E	S	L	S	A	E	I	N	F	A	A	A	K	L	A	R	A	C	A	D	E	W	T	A	R	T	P	E	K	P	R	Y	V	A	G	V	L	G	P	T	N
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	H	I	V	H	Y	A	T	R	A	I	G	G	V	G	L	I	M	Q	E	A	T	A	V	E	S	R	G	R	I	T	D	H	D	L	G	I	W	N	D	E	Q	V	K	E	L	K	K	I	V	D	I	C	K	A	.	.	.	.	.	.	.	.	.	.	.	N	G	A	V	M	G	I	Q	L	A	H	A	G
Template Known Secondary structure														T	T		S									S	S	G	G	G		S	S	T	T	S		B		S	S	T																.	.	.	.	.	.	.	.	.	.	.	T	T											G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.												.	.	.	.	.	.	.	100	.	.	.	.	.
		138	.	140	.	.	.												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Query Sequence		R	T	A	S	I	S	.	.	.	.	.	.	.	.	.	.	.	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	.	.	.	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	.	.	.	.	.	.	.	.	.	.	F	D	T	.	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																				.	.	.																						.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	C	N	I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y
Template Known Secondary structure		G	G				T	T	S					S	S	S			S	S	T	T	S																													T		S								T	T	S								T	T	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
							187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																															.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																															.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	A	.	.	.	.	.	.	.	.	L	G	P	D	E
Query Conservation		.	.	.	.	.																																																															.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																			.												.	.	.	.	.	.	.	.
Template Conservation																																																									.
Template Sequence		G	N	S	I	E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I	N	M	I	K	.	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	V	D	I	N	L	Y	P	G	Y
Template Known Secondary structure		S	S	S					T													T	S		T	T	S											S	S	T	T	S														T	.	T	T		S									S	S								T	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G
Query Conservation
Alig confidence																				.	.	.			.	.	.	.	.					.	.	.	.	.	.
Template Conservation																				.	.	.			.	.	.	.	.					.	.	.	.	.	.
Template Sequence		Q	V	K	Y	A	E	T	I	K	K	R	C	N	I	K	T	S	A	.	.	.	V	G	.	.	.	.	.	L	I	T	T	.	.	.	.	.	.	Q	E	L	A	E	E	I	L	S	N	E	R	A	D	L	V	A
Template Known Secondary structure		T												T						.	.	.		S	.	.	.	.	.	S				.	.	.	.	.	.										T	T	S		S
Template Predicted Secondary structure																				.	.	.			.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.						.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions