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Job DescriptionP13009
Confidence100.00%DateThu Jan 5 11:33:23 GMT 2012
Rank6Aligned Residues286
% Identity64%Templatec3k13A_
PDB info PDB header:transferaseChain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370.........380.........390.........400.........410.........420.........430..
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Query Sequence  DSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIM
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Template Sequence  EINFVNIGERCNVAGSRKFLRLVNEKKYDEALSIARQQVEDGALVIDVNXDDGLLDARTEXTTFLNLIXSEPEIARVPVX
Template Known Secondary structure 
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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   433......440.........450.........460.........470.........480.........490.........500.........510..
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Query Sequence  IDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEV
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Template Sequence  IDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVXAFDEKGQADTAARKIEVCERAYRLLVDKV
Template Known Secondary structure 
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   430.........440.........450.........460.........470.........480.........490.........500.........
 
   513......520.........530.........540.........550.........560.........570.........580.........590..
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Query Sequence  GFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGM
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Template Sequence  GFNPHDIIFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAXHAVFLYHAIQQGX
Template Known Secondary structure 


GGG





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GGGTTSTT


BGGGGGGGGTT
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   510.........520.........530.........540.........550.........560.........570.........580.........
 
   593......600.........610.........620.........630.........
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Query Sequence  DMGIVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYR
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Template Sequence  DXGIVNPGSVL. YSDIPADTLEKIEDVVLNRRPDAAERLIELAEALK
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   590.........600 .........610.........620.........630.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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