Job Description P13009 Confidence 66.19% Date Thu Jan 5 11:33:23 GMT 2012 Rank 189 Aligned Residues 222 % Identity 16% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		E	V	I	A	A	I	H	N	A	Y	F	E	A	G	A	D	I	I	E	T	N	T	F	N	S	T	T	I	A	M	A	D	Y	Q	.	.	.	.	M	E	S	L	S	A	E	I	N	F	A	A	A	K	L	A	R	A	C	A	D	E	W	T	A	R	T	P	E	K	P	R	Y	V	A	G	V	L	G	P	T	N
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	W	H	K	I	H	Y	P	A	R	A	V	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D	D	H	I	A	G	L	R	E	L	V	G	L	V	K	E	.	.	.	.	.	.	.	.	.	.	.	H	G	A	A	I	G	I	Q	L	A	H	A	G
Template Known Secondary structure														T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T	T															.	.	.	.	.	.	.	.	.	.	.	T	T											G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.											.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.								.	.	.																										.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.								.	.	.																										.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query Sequence		R	T	A	S	I	S	P	D	V	N	D	P	A	.	.	.	.	.	.	.	.	.	.	F	R	N	I	T	F	D	.	.	.	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	.	.	.	.	.	.	.	.	.	.	V	F	D	T	L	N	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.								.	.	.																										.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.								.	.	.																										.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	S	Q	V	P	G	E	I	I	A	P	S	A	V	P	F	D	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I	E	I	H	A	A	H	G	Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G
Template Known Secondary structure		G	G			S	S	S					S	S	S			S	S	T	T	S																													T		S								T	T									T	T	T					S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
								189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.									250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	.	.	.	.	.	.	.	.	G	P	D	E	L
Query Conservation		.	.	.	.	.	.																																																														.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.	.																																													.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	.	.	D	G	P	L	F	V	R	I	S	A	S	D	Y	H	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	D	L	V	D	V	S	S	G	A	I	V	P	A	R	M	N	V	Y	P	G	Y	Q
Template Known Secondary structure		S	S																				.	.		S								S				S	T	T	S			G	G	G											T	T											S	S								T	T	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	.	.	.	.	.	.	.	.	.	.	V	G	L	I	T	S	G	W	Q	.	.	.	.	A	E	E	I	L	Q	N	G	R	A	D	L	V	F	L	G
Template Known Secondary structure												T	T						.	.	.	.	.	.	.	.	.	.		S	S							.	.	.	.							T	T	S		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions