Job Description P13009 Confidence 94.84% Date Thu Jan 5 11:33:23 GMT 2012 Rank 64 Aligned Residues 171 % Identity 12% Template c3g0sA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 Resolution 1.85 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		Y	V	A	G	V	L	G	P	T	N	R	T	A	S	I	S	P	D	V	N	D	P	A	F	R	N	I	T	F	D	G	L	V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A
Query Conservation																																																							.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																					.	.	.	.	.														.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																							.	.
Template Sequence		S	I	V	A	L	V	T	P	M	D	E	.	.	.	.	.	.	.	.	.	.	.	.	K	G	N	V	S	R	.	.	.	.	S	C	L	K	K	L	I	D	Y	H	V	A	N	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	L	S	H	D	E	H	G	D	V	.	.	V	M	M	T	L	E	L
Template Known Secondary structure										B		T	.	.	.	.	.	.	.	.	.	.	.	.	T	S		B			.	.	.	.													T	T							S	S	T	T	T	T	G	G	G	S									.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																																							.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.													.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S	L	R	H	A	E	A	L	T	F	G	L	N	C	.	.	.	.	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P
Query Conservation																																															.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																						.	.	.	.																															.
Template Conservation																			.	.	.	.	.	.	.																																																								.
Template Sequence		A	D	G	R	I	P	V	I	A	G	T	G	A	N	A	T	A	.	.	.	.	.	.	.	E	A	I	S	L	T	Q	R	F	N	D	S	G	I	V	G	C	L	T	V	T	P	Y	Y	N	R	P	T	Q	E	G	L	F	Q	H	F	K	A	I	A	E	H	T	D	L	P	Q	I	L	Y	N	V	P	S	R	.
Template Known Secondary structure			T	T	S	S									S	S			.	.	.	.	.	.	.								T	T	T	T	S	S											S	S																	T		S	S											.
Template Predicted Secondary structure																			.	.	.	.	.	.	.																																																								.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.																																								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	F	G	E	Y	D	L	D	A	D	T	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	G	C	D	M	L	P	E	T	V	G	R	L	A	E	I	K	N	I	I	A	I	K	E	A	T	G	N	L	T	R	V	H	Q	I	K	E	L	V	S	D	D	F	I	L	L	S	G	D	D	A	S	A	L	D	F	M	Q	L	G	G	H	G	V	I	S	V	T	A	N	V	A	A	R	E	M	A
Template Known Secondary structure		.	.	.		S													T	S	T	T								S			T	T							T	T	S		T	T						S		G	G	G							T	T							S	G	G	G	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	R	A	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	M	C	K	L	A	A	E
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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