Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence43.45%DateThu Jan 5 11:33:23 GMT 2012
Rank294Aligned Residues65
% Identity22%Templatec3f7pA_
PDB info PDB header:structural protein/cell adhesionChain: A: PDB Molecule:plectin-1; PDBTitle: crystal structure of a complex between integrin beta4 and2 plectin
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   445....450..... ....460.........470.........480.........490.........500.........510..... ....
Predicted Secondary structure 


.





















....
Query SS confidence 










.



























































. . . .



Query Sequence  LKCIQGKGIVN. SISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFP. . . . PEDI
Query Conservation 

   

 


.


 




       
 







 
  

 
 
 
 
 
  

 
         
  ....  

Alig confidence 










.







....











....






..






















....



Template Conservation          
 

  

 

 ....

  

    
 ....       ..       
       
   



  
  


Template Sequence  VEGYQGLRCDNFTSSWRDGR. . . . LFNAIIHRHKPL. . . . LIDMNKV. . YRQTNLENLDQAFSVAERDLGVTRLLDPEDV
Template Known Secondary structure  TTTSTT




SSGGGTTS....
GG....G

..TTS







Template Predicted Secondary structure 

















....


....



..











Template SS confidence 















































































   199200.........210........ .220.........230 ....... ..240.........250.........260........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions