Job Description P13009 Confidence 89.24% Date Thu Jan 5 11:33:23 GMT 2012 Rank 103 Aligned Residues 129 % Identity 23% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.									.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query Sequence		D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	.	.	.	.	.	.	.	G	G	C	C	G	.	.	.	.	.	.	.	.	T	T	P	Q
Query Conservation																																																										.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.															.
Template Sequence		D	D	V	L	V	D	A	N	R	I	T	N	A	T	N	L	P	L	L	V	D	I	D	T	G	W	.	.	.	.	.	.	.	.	G	G	A	F	N	I	A	R	T	I	R	S	F	I	.	K	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G	K	E	C	V	P	A	G	E
Template Known Secondary structure																	S							T	T		S	.	.	.	.	.	.	.	.	S	S													.		T	T		S							B						T	T							B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.															.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		M	V	D	R	I	K	A	A	V	D	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	E	T	F	V	I	M	A	R	T	D	.	.	.	.	.	.	.	.	.	A	A	A	A	E	G	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		T	T	S								.	.	.	.	.	.	.	.	.																					T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150																									.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	D	I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I
Query Conservation
Alig confidence						.	.	.	.																		.	.	.	.	.	.	.
Template Conservation						.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		M	I	F	P	.	.	.	.	E	A	M	K	T	L	D	D	Y	R	R	F	K	E	A	V	K	.	.	.	.	.	.	.	V	P	I	L	A
Template Known Secondary structure						.	.	.	.					S													.	.	.	.	.	.	.	S		B
Template Predicted Secondary structure						.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions