Job Description P13009 Confidence 27.32% Date Thu Jan 5 11:33:23 GMT 2012 Rank 430 Aligned Residues 57 % Identity 18% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.								.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		N	I	V	G	V	V	L	Q	C	N	N	Y	E	I	V	D	L	G	V	M	V	P	A	E	K	I	L	R	T	A	K	E	V	N	A	D	L	I	G	L	.	.	.	.	.	.	.	S	G	L	I	T	P	S	L	D	E	M	V	N	V	A	K	E	M	E	R	Q	G	F	T	I	P	L	L	I
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence																	.	.	.																							.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	L	S	A	I	L	E	E	E	G	Y	H	P	D	.	.	.	T	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	V	W	X	P	D	G	D	G	V	.	.	.	.	.	.	.	.	.	N	F	I	D	F	I	K	E	N	S	P	D	S	V	V	I	V
Template Known Secondary structure											T	T					.	.	.			S	S											S			S						S			T	T			T	T	.	.	.	.	.	.	.	.	.	T										T	T
Template Predicted Secondary structure																	.	.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions