Job Description P13009 Confidence 95.28% Date Thu Jan 5 11:33:23 GMT 2012 Rank 61 Aligned Residues 155 % Identity 14% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.														.	.																									.	.	.	.	.	.	.
Template Conservation																																									.	.																									.	.	.	.	.	.	.
Template Sequence		F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	.	.	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	.	.	.	.	.	.	.	A	S	I	A	M	S	K	W
Template Known Secondary structure															T	T							S	S	G	G	G	T	G	G	G	S									.	.									T	T	S	S									S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.																									.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	.	.	.	.	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		A	E	S	I	G	V	D	G	L	L	V	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	.	.	.	.	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	K	N	I	V	A	V	K	E	A	S	G	N	I
Template Known Secondary structure					T	T		S									S	S																	T			S											.	.	.	.		S												T	T	S	S	S								S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																							293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	I	A	Q	I	K	A	L	C	G	D	K	L	D	I	Y	S	G	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A	N	V	I	P	E	D	V	H	N	M	C	E	L	Y	L	N
Template Known Secondary structure												G	G	G						S		G	G	G							T	T							S	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions