Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence42.11%DateThu Jan 5 11:33:23 GMT 2012
Rank300Aligned Residues53
% Identity21%Templatec3aemD_
PDB info PDB header:lyaseChain: D: PDB Molecule:methionine gamma-lyase; PDBTitle: reaction intermediate structure of entamoeba histolytica methionine2 gamma-lyase 1 containing michaelis complex and methionine imine-3 pyridoxamine-5'-phosphate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   430.........440.........450.........460... ......470.........480..
Predicted Secondary structure 













.


Query SS confidence 

































.


















Query Sequence  PIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGV. DAFIHHAKLLRRYGAAVVV
Query Conservation 

 



   






   

 





 



.
       
 







 
Alig confidence 

































.


















Template Conservation             
       
  
      
  
    
  
  

   
  

 
Template Sequence  VDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVV
Template Known Secondary structure 
TTS

TTSS
TTT




T
Template Predicted Secondary structure 



















Template SS confidence 





















































   1626...1630.........1640.........1650.........1660.........1670.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions