 |
| Job Description | P13009 | | Confidence | 67.86% | Date | Thu Jan 5 11:33:23 GMT 2012 |
| Rank | 184 | Aligned Residues | 73 |
| % Identity | 14% | Template | c2zklA_ |
| PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:capsular polysaccharide synthesis enzyme cap5f; |
PDBTitle: crystal structure of capsular polysaccharide assembling protein capf2 from staphylococcus aureus
|
| Resolution | 2.61 Å |
|
| | |
761 | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | |
. | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | |
|
|
|  | | | |  |
|
|
|
|
| | | | | | | | | | | |
|
|
| | | | |
|
|
| | |
|
| . | | | | | | | | | | | | | |
|
|
|
|
|
| | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
I | G | K | N | I | V | G | V | V | L | Q | C | N | N | Y | E | I | V | D | L | G | V | M | V | P | A | E | K | I | L | R | T | A | K | E | V | N | A | D | L | I | G | L | S | G | L | I | T | P | S | . |
L | D | E | M | V | N | V | A | K | E | M | E | R | Q | G | F | T | I | P | L | L | I | G | G |
| Query Conservation | |
|
|
|
|
|
| | |
|
| |
|
|
|
| |
|
|
|
|
| | |
|
| |
| |
|
| | |
| |
| | |
|
| |
|
|
|
|
|
|
|
| |
| . | | | |
| | | | | | |
| | | |
| | | |
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
| | |
| | | |
| | |
|
| | | | |
| | |
| | | |
| | |
| | | | |
| | . |
|
|
|
|
|
| | | | | |
| | | |
| | |
|
| |
| | | | |
| | | | |
| | |
|
|
| Template Sequence | |
V | G | K | N | L | K | A | D | L | T | S | T | T | D | H | H | I | F | E | V | H | R | Q | T | K | E | E | E | L | E | S | A | L | L | K | A | D | F | . |
I | V | H | L | A | G | V | F | S | L | G | N | V | S | Y | L | D | H | V | L | D | I | L | T | R | N | T | K | K | P | A | I | L | L | S | S |
| Template Known Secondary structure | |
| | | | | | | | | | | |
|
|
| | | | | |
| T | T |
|
| | | | | | | | | | |
| S | | . | | | |
|
|
|
|
|
| S | S |
|
|
| | | | | | | | | | T | T |
| S | S |
|
| | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | |
|
|
|
| | | | | |
|
|
|
|
| | | | | | | | |
|
|
|
| | . | | | |
| | | | | | | | | | | | | | | | | | | | | |
|
|
|
|
| | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
