Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence99.65%DateThu Jan 5 11:33:23 GMT 2012
Rank35Aligned Residues135
% Identity18%Templatec2yxbA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:coenzyme b12-dependent mutase; PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   744.....750.........760.........770.........780.........790.........800.........810.........820...
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMER
Query Conservation    

 

















  

 



 




  

 
 

  
 
  

 







 
   
      
  
Alig confidence 















































































Template Conservation   
  



     
 
  
   
   
   
 

  

                 


 

  
             
  
Template Sequence  RRRYKVLVAKXGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAXAAVQEDVDVIGVSILNGAHLHLXKRLXAKLRE
Template Known Secondary structure 

S
SSSS

TT



SB

TT
SSSS
Template Predicted Secondary structure 


























Template SS confidence 















































































   18.20.........30.........40.........50.........60.........70.........80.........90.......
 
   824.....830.........840.........850.........860.........870........
Predicted Secondary structure 
























Query SS confidence 






















































Query Sequence  QGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDD
Query Conservation   
   






  
           
 
 
 
  

   
     
        
Alig confidence 






















































Template Conservation        





             
 
    

    

   
       
 
 
Template Sequence  LGADDIPVVLGGTIPIPDLEPLRSLGIREIFLPGTSLGEIIEKVRKLAEEKRXRE
Template Known Secondary structure  TT
TTS



TT


TT

Template Predicted Secondary structure 
















Template SS confidence 






















































   98.100.........110.........120.........130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions