Job Description P13009 Confidence 99.94% Date Thu Jan 5 11:33:23 GMT 2012 Rank 22 Aligned Residues 242 % Identity 19% Template c2y5sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of burkholderia cenocepacia dihydropteroate2 synthase complexed with 7,8-dihydropteroate. Resolution 1.95 Å

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		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.						.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	.	.	.	.	.	D	E	G	M	L	D	A	E	A
Query Conservation																																																																				.	.	.	.	.
Alig confidence																		.	.	.							.						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																		.	.	.							.						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	A	P	L	Q	C	G	R	F	E	L	T	F	E	R	.	.	.	P	L	V	M	G	I	.	L	N	A	T	P	.	.	.	.	.	.	.	.	.	.	.	A	R	D	D	A	L	R	R	A	E	R	M	I	A	E	G	A	D	L	L	D	I	G	G	E	S	T	R	P	G	A	P	P	V	P	L	D	E
Template Known Secondary structure									T	T						S	S	.	.	.							.						.	.	.	.	.	.	.	.	.	.	.		T	T												T	T		S						S	S			S	T	T
Template Predicted Secondary structure																		.	.	.							.						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.		.	.	.	30	.												.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																	.																					.	.												.	.	.	.																						.	.	.	.	.	.
Template Conservation																	.																					.	.												.	.	.	.
Template Sequence		E	L	A	R	V	I	P	L	V	E	A	L	R	P	L	.	N	V	P	L	S	I	D	T	Y	K	P	A	V	M	R	A	A	L	A	A	.	.	G	A	D	L	I	N	D	I	W	G	F	.	.	.	.	R	Q	P	G	A	I	D	A	V	R	D	G	N	S	G	L	C	A	M	H	M	L	G	E	P	Q	T
Template Known Secondary structure														G	G	G	.		S																			.	.	T		S					T	T	T	T	.	.	.	.		S	T	T						S	S	S	S												T	T	T
Template Predicted Secondary structure																	.																					.	.												.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
					486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I	S	G	G	V
Query Conservation		.	.	.
Alig confidence		.	.	.																								.															.
Template Conservation																												.															.
Template Sequence		M	Q	V	G	E	P	D	Y	G	D	V	V	T	D	V	R	D	F	L	A	A	R	A	Q	A	L	.	R	D	A	G	V	A	A	E	R	I	C	V	D	P	.	G	F	G	F	G	K	A	V	V	D	D	N	Y	A	L	L	A	A	L	P	D	T	A	P	A	R	P	D	G	R	A	Y	P	I	L	A	G	M
Template Known Secondary structure		T								S	S																	.			T	T			G	G	G						.		T	T	S	S	S		T	T									T	G	G	G	G	S		B		T	T	S	S	B			B
Template Predicted Secondary structure																												.															.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		563	.	.	.	.			.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		S	N	V	S	F	.	.	S	F	R	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y	Y	A	I	R	N	G	M	D	M	G	I	V	N	A	G	Q	L
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		S	R	K	S	M	L	G	A	V	I	G	G	K	P	P	L	E	R	V	A	A	S	V	A	A	A	L	C	A	V	E	R	G	A	A	I	V	R	V	H	D	V
Template Known Secondary structure		T	T						T	T	T	T	S			G	G	G															T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions