Job Description P13009 Confidence 99.81% Date Thu Jan 5 11:33:23 GMT 2012 Rank 31 Aligned Residues 200 % Identity 27% Template c2vefB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae Resolution 1.8 Å

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		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K
Query Conservation
Alig confidence																											.																																									.	.
Template Conservation																											.																																									.	.
Template Sequence		E	Q	A	L	Q	Q	A	R	K	L	I	A	E	G	A	S	M	L	D	I	G	G	E	S	Y	.	V	E	I	E	E	E	I	Q	R	V	V	P	V	I	K	A	I	R	K	E	S	D	V	L	I	S	I	D	T	W	K	S	Q	V	A	E	A	A	L	A	.	.	A	G	A	D	L	V	N	D	I	T	G	L
Template Known Secondary structure															T		S										.																														S											.	.	T	T							T	T	T	T
Template Predicted Secondary structure																											.																																									.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.																									.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation								.	.	.																																																																.
Template Sequence		M	G	D	E	K	M	.	.	.	P	H	V	V	A	E	A	R	A	Q	V	V	I	M	F	N	P	V	M	A	R	P	Q	H	P	S	S	L	I	F	P	H	F	G	F	T	E	E	E	L	A	D	F	E	T	L	P	I	E	E	L	M	E	A	F	F	E	R	A	L	A	R	A	.	A	E	A	G	I	A	P
Template Known Secondary structure			S		T	T		.	.	.								T														T	T		G	G	G	T	T	S														T	T	S																		.				T			G
Template Predicted Secondary structure								.	.	.																																																																.
Template SS confidence
		116	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.																			.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I	S	G	G	V	S	N	V	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	R	G	N	D	P	V	R	E	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.													.	.	.	.													.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.
Template Conservation									.													.	.	.	.													.	.																																		.	.	.	.
Template Sequence		E	N	I	L	L	D	P	.	G	I	G	F	G	L	T	K	K	E	N	L	.	.	.	.	L	L	L	R	D	L	D	K	L	H	Q	K	.	.	G	Y	P	I	F	L	G	V	S	R	K	R	F	V	I	N	I	L	E	E	N	G	F	E	V	N	P	E	T	E	L	G	F	.	.	.	.	R	N	R	D	T
Template Known Secondary structure		G	G						.		T	T	S	S								.	.	.	.					T						T	T	.	.	S	S		B					S	S											T	T					T	T	S					.	.	.	.
Template Predicted Secondary structure									.													.	.	.	.													.	.																																		.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	A	V	F	L	Y	Y	A	I	R	N	G	M	D	M	G	I	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	A	H	V	T	S	I	A	A	R	Q	G	V	E	V	V	R	V	H
Template Known Secondary structure													T	T		S					S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions