Job Description P13009 Confidence 95.47% Date Thu Jan 5 11:33:23 GMT 2012 Rank 57 Aligned Residues 205 % Identity 12% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.														.	.																									.	.	.	.	.	.	.
Template Conservation																																									.	.																									.	.	.	.	.	.	.
Template Sequence		E	V	A	L	H	D	L	V	E	W	Q	I	E	E	G	S	F	G	L	V	P	C	G	T	T	G	E	S	P	T	L	S	K	S	E	H	E	Q	V	.	.	V	E	I	T	I	K	T	A	N	G	R	V	P	V	I	A	G	A	G	S	N	S	T	A	.	.	.	.	.	.	.	E	A	I	A	F	V	R	H
Template Known Secondary structure															T	T		S				T	T	S	G	G	G	T	G	G	G	S									.	.									T	T	S	S		B							S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.																									.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90
		235	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		L	R	H	A	E	A	L	T	F	G	L	N	C	.	.	.	.	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																															.	.	.	.																	.	.	.	.	.
Template Conservation																																																	.	.	.	.																	.	.	.	.	.
Template Sequence		A	Q	N	A	G	A	D	G	V	L	I	V	S	P	Y	Y	N	K	P	T	Q	E	G	I	Y	Q	H	F	K	A	I	D	A	A	S	T	I	P	I	I	V	Y	N	I	P	G	R	.	.	.	.	S	A	I	E	I	H	V	E	T	L	A	R	I	F	E	D	.	.	.	.	.	C	P	N	V	K	G	V	D
Template Known Secondary structure					T	T		S									S	S																			S	S											.	.	.	.		S															.	.	.	.	.		T	T
Template Predicted Secondary structure																																																	.	.	.	.																	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	.	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q
Query Conservation																																													.
Alig confidence																	.	.	.	.	.	.	.																						.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		A	T	G	N	L	L	R	P	S	L	E	R	M	A	C	.	.	.	.	.	.	.	G	E	D	F	N	L	L	T	G	E	D	G	T	A	L	G	Y	M	A	H	G	G	H	G	C	I	S	V	T	A	N	V	A	P	A	L	C	A	D	F	Q	Q	A	C	L	N	G	D	F	A	A	A	L	K	L	Q	D	R
Template Known Secondary structure			S			T										S	.	.	.	.	.	.	.		T	T	S	B				S		G	G	G							T	T							S	G	G	G	T														T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions