Job Description P13009 Confidence 91.67% Date Thu Jan 5 11:33:23 GMT 2012 Rank 88 Aligned Residues 151 % Identity 16% Template c2r94B_ PDB info PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxy-(6-phospho-)gluconate aldolase; PDBTitle: crystal structure of kd(p)ga from t.tenax Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																							.	.	.	.	.				.
Query SS confidence																							.	.	.	.	.				.
Query Sequence		V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	E	T	V	.	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N
Query Conservation																							.	.	.	.	.				.
Alig confidence																							.	.	.	.	.				.																	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		P	E	L	F	A	N	H	V	K	N	I	T	S	K	G	V	D	V	V	F	V	A	G	T	T	G	L	G	P	A	L	S	L	Q	E	K	M	E	L	T	D	A	A	T	S	A	.	.	.	.	.	.	A	R	R	V	I	V	Q	V	A	S	L	N	A	D	E	.	.	.	.	.	.	.	A	I	A	L	A	K
Template Known Secondary structure														T	T	T							T	S	T	T	T	T	G	G	G	S																.	.	.	.	.	.		S									S	S				.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.						.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	H	A	E	A	L	T	F	G	L	N	C	.	.	.	.	.	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																															.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		Y	A	E	S	R	G	A	E	A	V	A	S	L	P	P	Y	Y	F	P	R	L	S	E	R	Q	I	A	K	Y	F	R	D	L	C	S	A	V	S	I	P	V	F	L	Y	N	Y	P	A	A	.	.	.	.	V	G	R	D	V	D	A	R	A	A	K	E	L	G	C	I	R	G	V	K	D	T	N	E	S	L	A
Template Known Secondary structure						T	T		S							S		S		S																			S	S											.	.	.	.		S	S											S										S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
																					293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	T	L	A	Y	K	R	Y	L	P	Q	A	R	V	Y	N	G	S	D	S	L	V	F	A	S	F	A	V	R	L	D	G	V	V	A	S	S	A	N	Y	L	P	E	L	L	A	G	I	R	D	A	V	A	A
Template Known Secondary structure											T	T	S							G	G	G							T	T		S					G	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions