Job Description P13009 Confidence 94.54% Date Thu Jan 5 11:33:23 GMT 2012 Rank 68 Aligned Residues 198 % Identity 15% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	.	.	.	.	.	.	.	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																																		.					.	.	.	.	.	.	.
Template Conservation																																																																.					.	.	.	.	.	.	.
Template Sequence		Q	P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	D	W	C	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	.	E	V	D	R	.	.	.	.	.	.	.	L	T	E	L	H	D
Template Known Secondary structure															T		S						T	T			S		T	T	S																					S	S											.		T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.					.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.								.	.	.	.	250	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.																			.	.	.
Query SS confidence																																																										.	.	.																			.	.	.
Query Sequence		S	L	R	H	A	E	A	L	T	F	G	L	N	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	.	.	.	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	.	.	.
Query Conservation																																																										.	.	.																			.	.	.
Alig confidence																		.	.	.																									.	.	.	.	.									.	.	.				.															.	.	.
Template Conservation																		.	.	.																									.	.	.	.	.															.
Template Sequence		V	A	V	A	N	G	A	G	A	L	L	I	N	A	M	P	.	.	.	V	G	L	S	A	V	R	M	L	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	.	.	.	.	.	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	.	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P
Template Known Secondary structure						T	T											.	.	.											T	T			S							T	T		.	.	.	.	.					S		T	T	S						.										T		S
Template Predicted Secondary structure																		.	.	.																									.	.	.	.	.															.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
				308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350								.	.	.	.	.	.	.	.	.	360	.	.	.	.							.	.	.	.	.	370	.	.
Predicted Secondary structure		.	.																																												.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence		.	.																																												.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		.	.	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	.	.	.	.	.	.	.	G	E	D	S	L	F	V	N	V	G	E	R	T	N	.	.	.	.	.	.	V	T	G	S	A	K	F	K
Query Conservation		.	.																																												.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence		.	.																				.	.																							.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		G	F	G	P	R	M	M	T	P	E	H	E	V	L	D	C	I	R	A	C	L	.	.	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	D	S	A	A	T	L	E	N	V	Y	R	K	V	G	S	A	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	A	A	G	A	T	S	I	R
Template Known Secondary structure			S	S	G	G	G																.	.	S		B	T	T	B									S	S			T	T	T										S	S							S	T	T	T	T	T		T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		373	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	W	D	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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