Job Description P13009 Confidence 60.63% Date Thu Jan 5 11:33:23 GMT 2012 Rank 225 Aligned Residues 225 % Identity 12% Template c2qf7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase protein; PDBTitle: crystal structure of a complete multifunctional pyruvate carboxylase2 from rhizobium etli Resolution 2.00 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.								.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.																															.
Query SS confidence																																.	.	.	.	.	.	.																															.
Query Sequence		R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	E	T	V	F	D	T	L	N	A	K	A	A	V	.	.	.	.	.	.	.	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	.	S	G	Q	T	T	E	A	F	Y	N	S	L
Query Conservation																																.	.	.	.	.	.	.																															.
Alig confidence																								.								.	.	.	.	.	.	.																															.
Template Conservation																								.
Template Sequence		A	R	I	A	G	T	Y	S	H	A	L	P	N	L	L	S	L	E	C	W	G	G	.	A	T	F	D	V	S	M	R	F	L	T	E	D	P	W	E	R	L	A	L	I	R	E	G	A	P	N	L	L	L	Q	M	L	L	R	G	A	N	G	V	G	Y	T	N	Y	P	D	N	V	V	K	Y	F	V	R	Q	A
Template Known Secondary structure													T	T		S							T	.	T																									T	T	S								T	T	T	B	T		S	S
Template Predicted Secondary structure																								.
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310				.
Predicted Secondary structure																.																																																														.	.	.
Query SS confidence																.																																																														.	.	.
Query Sequence		R	H	A	E	A	L	T	F	G	L	N	C	A	L	.	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	.	.	.	C
Query Conservation																.																																																														.	.	.
Alig confidence																.																																																			.									.		.	.	.
Template Conservation																																																																			.									.
Template Sequence		A	K	G	G	I	D	L	F	R	V	F	D	C	L	N	W	V	E	N	M	R	V	S	M	D	A	I	A	E	E	N	K	L	C	E	A	A	I	C	Y	T	G	D	I	L	N	S	A	R	P	K	Y	D	L	K	Y	Y	T	N	L	A	V	E	L	E	.	K	A	G	A	H	I	I	A	.	V	D	M	A	G
Template Known Secondary structure					T									T	T			G	G	G	G										T	T											S		T	T		T	T	S	G	G	G														.		T	T		S				.			T	T
Template Predicted Secondary structure																																																																			.									.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.		.	710	.	.	.	.	.	.		.	.	.	720	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	K	P	A	A	A	K	V	L	F	K	A	L	R	E	A	T	G	L	P	I	H	F	H	T	H	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	A	A	A	T	V	L	A	A	V
Template Known Secondary structure																				S	S								B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.																																								.	.	.	.	.	.	.	760	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.		.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	N	G	A	Q	I	I	D	I	N	M	D	.	E	G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D
Query Conservation														.
Alig confidence														.																				.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		E	A	G	V	D	A	V	D	A	A	M	D	A	L	S	G	N	T	S	Q	P	C	L	G	S	I	V	E	A	L	S	G	.	.	.	.	S	E	R	D	P	G	L	D
Template Known Secondary structure			T	T		S					B		G	G	G		S	B	T	S			B									T	T	.	.	.	.	S	T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.					.	.	.	.	800	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions