Job Description P13009 Confidence 32.96% Date Thu Jan 5 11:33:23 GMT 2012 Rank 367 Aligned Residues 148 % Identity 22% Template c2pcqA_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		V	A	A	Y	R	E	S	T	K	A	L	V	E	G	G	A	D	L	I	L	I	.	.	.	.	.	E	T	V	F	D	T	L	N	A	K	A	A	V	F	A	V	K	T	E	F	E	A	L	G	V	E	L	P	I	M	I	S	G	T	I	T	D	A	S	G	R	T	L	S	G	Q	T	T	E	A	F	Y	N	S
Query Conservation																							.	.	.	.	.
Alig confidence											.												.	.	.	.	.												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation											.																												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		E	E	A	F	R	E	L	A	Q	.	A	L	E	P	L	V	D	G	L	L	V	Y	G	S	N	G	E	G	V	H	L	T	P	E	E	R	A	.	.	.	.	.	.	R	G	L	R	A	L	R	P	R	K	P	F	L	V	G	L	X	E	E	T	L	P	.	.	.	.	.	.	.	Q	A	E	G	A	L	L	E
Template Known Secondary structure											.			G	G	G	S	S					T		T	T	T	T	G	G	G	S							.	.	.	.	.	.					T				S	S									S	S			.	.	.	.	.	.	.
Template Predicted Secondary structure											.																												.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure														.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	H	A	E	A	L	T	F	G	L	N	.	.	.	.	.	C	A	L	G	P	D	E	L	R	Q	Y	V	Q	E	L	S	R	I	A	E	C	Y	V	T	A	H	P	N	A	G	L	P	N	A	F	G	E	Y	D	L	D	A	D	T	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																		.	.													.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.													.	.	.	.
Template Sequence		A	K	A	A	G	A	X	A	L	L	A	T	P	P	R	Y	Y	H	G	S	L	G	A	G	L	L	R	Y	Y	E	A	L	A	E	.	.	K	X	P	L	F	L	Y	H	V	P	Q	N	.	.	.	.	T	K	V	D	L	P	L	E	A	V	E	A	L	A	P	H	P	N	V	L	G	I	K	D	S	S	G	D
Template Known Secondary structure						T		S									T	T	G	G	G	T	T	T												.	.		S											.	.	.	.														T	T	S	T	T								S
Template Predicted Secondary structure																																				.	.													.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
																							293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	R	E	W	A	Q	A	G	F	L	N	I	V	G	G	C	C	G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	R	I	A	F	Y	Q	A	R	L	Q	E	F	R	V	Y	T	G	H	A	P	T	F	L	G	A	L	A	L	G	A	E	G	G	I	L	A	A	A	N	L	A	P	R	A	Y	R	A	L	L	D	H	F	R	E
Template Known Secondary structure													S	S								G	G	G							T	T							G	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions