Job Description P13009 Confidence 100.00% Date Thu Jan 5 11:33:23 GMT 2012 Rank 4 Aligned Residues 325 % Identity 49% Template c2o2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: crystal structure of the activation domain of human2 methionine synthase isoform/mutant d963e/k1071n Resolution 1.60 Å

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		900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.		.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.		.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.			.	.	.	.
Predicted Secondary structure																					.																		.																																					.	.
Query SS confidence																					.																		.																																					.	.
Query Sequence		R	T	P	P	V	T	L	E	A	A	R	D	N	D	F	A	F	D	W	.	Q	A	Y	T	P	P	V	A	H	R	L	G	V	Q	E	V	E	.	A	S	I	E	T	L	R	N	Y	I	D	W	T	P	F	F	M	T	W	S	L	A	G	K	Y	P	R	I	L	E	D	E	V	V	G	V	.	.	E	A	Q	R
Query Conservation																					.																		.																																					.	.
Alig confidence																					.																		.																																					.	.
Template Conservation
Template Sequence		E	R	R	Y	L	P	L	S	Q	A	R	K	S	G	F	Q	M	D	W	L	S	E	P	H	P	V	K	P	T	F	I	G	T	Q	V	F	E	E	Y	D	L	Q	K	L	V	D	Y	I	D	W	K	P	F	F	D	V	W	Q	L	R	G	K	Y	P	N	R	G	F	P	K	I	F	N	D	K	G	E	A	R	K
Template Known Secondary structure					B									T	B					G	G	G								S		S						S									T	T																S			T	T			G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		926	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.				.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		L	F	K	D	A	N	D	M	L	D	K	L	S	A	E	K	T	L	N	P	R	G	V	V	G	L	F	P	A	N	R	V	G	D	D	I	E	I	Y	R	D	E	T	R	T	H	V	.	.	.	I	N	V	S	H	H	L	R	Q	Q	T	E	K	T	G	F	A	N	Y	C	L	A	D	F	V	A	P	K	L	S
Query Conservation																																																	.	.	.
Alig confidence																																																	.	.	.
Template Conservation
Template Sequence		V	Y	D	D	A	H	N	M	L	N	T	L	I	S	Q	K	K	L	R	A	R	G	V	V	G	F	W	P	A	Q	S	I	Q	D	D	I	H	L	Y	A	E	A	A	V	P	Q	A	A	E	P	I	A	T	F	Y	G	L	R	Q	Q	A	E	N	S	T	E	P	Y	Y	C	L	S	D	F	I	A	P	L	H	S
Template Known Secondary structure																T	T		S															T	T							T	T			G	G	G	S			S										B							B			G	G	G	G	S		B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1009	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
		1053	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	D	Y	I	G	A	F	A	V	T	G	G	L	E	E	D	A	L	A	D	A	F	E	A	Q	H	D	D	Y	N	K	I	M	V	K	A	L	A	D	R	L	A	E	A	F	A	E	Y	L	H	E	R	V	R	K	V	Y	W	G	Y	A	P	N	E	N	L	S	N	E	E	L	I	R	E	N	Y	Q	G
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		G	I	R	D	Y	L	G	L	F	A	V	A	C	F	.	G	V	E	E	L	S	K	A	Y	E	D	D	G	D	D	Y	S	S	I	M	V	K	A	L	G	D	R	L	A	E	A	F	A	E	E	L	H	E	R	V	R	R	E	L	W	A	Y	C	G	S	E	Q	L	D	V	A	D	L	R	R	L	R	Y	K	G
Template Known Secondary structure		S														.	S											T	T																														T	T	S		T	T	T	T										T	T		S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		1092	.	.	.	.	.	.	.	1100	.	.	.	.	.		.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	P	A	P	G	Y	P	A	C	P	E	H	T	E	K	A	T	I	W	E	L	L	E	V	E	K	H	T	G	M	K	L	T	E	S	F	A	M	W	P	G	A	S	V	S	G	W	Y	F	S	H	P	D	S	K	Y	Y	A	V	A	Q	I	Q	R	D	Q	V	E	D	Y	A	R	R	K	G	M	S	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	P	A	P	G	Y	P	S	Q	P	D	H	T	E	K	L	T	M	W	R	L	A	D	I	E	Q	S	T	G	I	R	L	T	E	S	L	A	M	A	P	A	S	A	V	S	G	L	Y	F	S	N	L	K	S	K	Y	F	A	V	G	K	I	S	K	D	Q	V	E	D	Y	A	L	R	K	N	I	S	V	A
Template Known Secondary structure		B				T	T	S	T	T	S			T	T									T	T											T	T	S				S	S	S							B			T	T									B													T
Template Predicted Secondary structure
Template SS confidence
		1171	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
		1213	.	.	.	.	.	.	1220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	E	R	W	L	A	P	N	L	G	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	E	K	W	L	G	P	I	L	G	Y	D
Template Known Secondary structure							T	G	G	G	B	S
Template Predicted Secondary structure
Template SS confidence
		1251	.	.	.	.	.	.	.	.	1260	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions