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Job DescriptionP13009
Confidence100.00%DateThu Jan 5 11:33:23 GMT 2012
Rank4Aligned Residues325
% Identity49%Templatec2o2kA_
PDB info PDB header:transferaseChain: A: PDB Molecule:methionine synthase; PDBTitle: crystal structure of the activation domain of human2 methionine synthase isoform/mutant d963e/k1071n
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   900.........910........ .920.........930..... ....940.........950.........960.........970. ....
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Query Sequence  RTPPVTLEAARDNDFAFDW. QAYTPPVAHRLGVQEVE. ASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGV. . EAQR
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Template Sequence  ERRYLPLSQARKSGFQMDWLSEPHPVKPTFIGTQVFEEYDLQKLVDYIDWKPFFDVWQLRGKYPNRGFPKIFNDKGEARK
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B

TB



GGG






S
SS


TT


S

TT

GGGG


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   926...930.........940.........950.........960.........970.........980.........990.........1000.....
 
   976...980.........990.........1000.........1010.........1020.. .......1030.........1040.........1050..
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Query Sequence  LFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHV. . . INVSHHLRQQTEKTGFANYCLADFVAPKLS
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Template Sequence  VYDDAHNMLNTLISQKKLRARGVVGFWPAQSIQDDIHLYAEAAVPQAAEPIATFYGLRQQAENSTEPYYCLSDFIAPLHS
Template Known Secondary structure  TT
STT

TT

GGGS

S




B





B

GGGGS
BGGG
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   10091010.........1020.........1030.........1040.........1050.........1060.........1070.........1080........
 
   1053......1060.........1070.........1080.........1090.........1100.........1110.........1120.........1130..
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Query Sequence  GKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQG
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Template Sequence  GIRDYLGLFAVACF. GVEELSKAYEDDGDDYSSIMVKALGDRLAEAFAEELHERVRRELWAYCGSEQLDVADLRRLRYKG
Template Known Secondary structure  S

.STT
TTS
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TT
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   1092.......1100..... ....1110.........1120.........1130.........1140.........1150.........1160.........1170
 
   1133......1140.........1150.........1160.........1170.........1180.........1190.........1200.........1210..
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Query Sequence  IRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARRKGMSVT
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Template Sequence  IRPAPGYPSQPDHTEKLTMWRLADIEQSTGIRLTESLAMAPASAVSGLYFSNLKSKYFAVGKISKDQVEDYALRKNISVA
Template Known Secondary structure  B


TTSTTS

TTTT


TTS
SSSB

TT







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T

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   1171........1180.........1190.........1200.........1210.........1220.........1230.........1240.........1250
 
   1213......1220.....
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Query Sequence  EVERWLAPNLGYD
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Template Sequence  EVEKWLGPILGYD
Template Known Secondary structure  TGGGBS

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   1251........1260...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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