Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence35.01%DateThu Jan 5 11:33:23 GMT 2012
Rank354Aligned Residues82
% Identity12%Templatec2jrlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   764.....770.........780.........790.........800.........810.........820.........830.........840..
Predicted Secondary structure 


























.
Query SS confidence 














































































.
Query Sequence  NIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHT.
Query Conservation 


  

 



 




  

 
 

  
 
  

 







 
   
      
   
   






  
    .
Alig confidence 

















...






















..
































.
Template Conservation    
   
   
  
    ...   


  
     
 

 
  
..
   
      
        

 

         
Template Sequence  SSLSAILEEEGYHPDTAK. . . TLREAEKKIKELFFPVIVLDVWM. . PDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAV
Template Known Secondary structure  TT
B

S...
TTS

SS

..SSS
STTT
SS
SS

Template Predicted Secondary structure 



...












..



















Template SS confidence 















































































   15....20.........30.. .......40.........50..... ....60.........70.........80.........
 
   843......850
Predicted Secondary structure  ..




Query SS confidence  . .







Query Sequence  . . AVKIEQNY
Query Conservation  ..       
Alig confidence  ..







Template Conservation       

  
Template Sequence  KAIKKGAYEF
Template Known Secondary structure  T
Template Predicted Secondary structure 



Template SS confidence 









   90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions