Job Description P13009 Confidence 99.88% Date Thu Jan 5 11:33:23 GMT 2012 Rank 30 Aligned Residues 225 % Identity 17% Template c2h9aB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase, iron- PDBTitle: corrinoid iron-sulfur protein Resolution 1.90 Å

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.						.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																															.	.	.	.	.
Query SS confidence																																	.	.																															.	.	.	.	.
Query Sequence		P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	.	.	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	D	E	G	M	L	.	.	.	.	.	D	A	E	A	A	M	V	R	F	L	N	L
Query Conservation																																	.	.																															.	.	.	.	.
Alig confidence																																	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		T	F	E	G	E	M	P	N	P	P	R	F	A	L	E	V	F	D	T	P	P	T	D	W	P	D	I	L	V	E	P	F	K	D	V	I	N	D	P	V	A	W	A	K	K	C	V	E	Y	G	A	D	I	V	A	L	R	L	V	S	A	H	P	D	G	Q	N	R	S	G	A	E	L	A	E	V	C	K	A	V
Template Known Secondary structure		T	T	S	S				S										S	S			S	S							G	G	G	T	T	T	T	T												T	T		S							G	G	G		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																			.	.	.	.	.															.
Query SS confidence																			.	.	.	.	.															.
Query Sequence		I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	.	.	.	.	.	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	.	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T
Query Conservation																			.	.	.	.	.															.
Alig confidence					.	.	.	.											.	.	.	.	.															.											.	.	.	.																								.	.	.	.	.	.
Template Conservation					.	.	.	.																																									.	.	.	.																								.	.	.	.	.	.
Template Sequence		A	D	A	.	.	.	.	I	D	V	P	L	M	I	I	G	C	G	V	E	E	K	D	A	E	I	F	P	V	I	G	E	A	L	S	G	R	N	C	L	L	S	S	A	T	K	D	.	.	.	.	N	Y	K	P	I	V	A	T	C	M	V	H	G	H	S	V	V	A	S	A	P	L	D	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.		S	S								S																T	T	T	S									T	T	.	.	.	.	T												T								S	S		.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.																																									.	.	.	.																								.	.	.	.	.	.
Template SS confidence
		118	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.								.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	.	.	.	.	.	.	.	E	L	P	H	A	L	I	S	G	G	V	S	N	V	S
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence		.	.	.	.												.																									.	.	.	.	.	.	.												.	.	.	.	.	.	.			.
Template Conservation		.	.	.	.												.																									.	.	.	.	.	.	.																					.
Template Sequence		.	.	.	.	I	N	L	S	K	Q	L	N	I	M	I	.	M	E	M	N	L	A	P	N	R	I	I	M	D	P	L	I	G	A	L	G	Y	G	I	E	.	.	.	.	.	.	.	Y	S	Y	S	I	I	E	R	M	R	L	G	A	L	T	G	D	K	I	L	.	A	M	P	V	V	C	F	I	G	Q	E	A
Template Known Secondary structure		.	.	.	.												.		T	T	T			G	G	G										T	T	T	T			.	.	.	.	.	.	.															T	T		G	G	G	.		S		B
Template Predicted Secondary structure		.	.	.	.												.																									.	.	.	.	.	.	.																					.
Template SS confidence
						184	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.								.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250
		567	.	.	570											.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																.
Query Sequence		F	S	F	R	.	.	.	.	.	.	.	.	.	.	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y	.	Y	A	I	R	N	G	M	D	M	G	I	V	N
Query Conservation						.	.	.	.	.	.	.	.	.	.																.
Alig confidence						.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		W	K	A	K	E	A	K	D	P	E	V	A	E	W	G	D	Y	A	L	R	A	I	H	W	E	T	V	T	T	V	A	L	I	Q	A	G	G	H	L	F	V	M	R
Template Known Secondary structure		T	T	S						S			G	G	G																						T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions