Job Description P13009 Confidence 99.37% Date Thu Jan 5 11:33:23 GMT 2012 Rank 36 Aligned Residues 211 % Identity 13% Template c2h9aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:carbon monoxide dehydrogenase corrinoid/iron- PDBTitle: corrinoid iron-sulfur protein Resolution 1.90 Å

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		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.															.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		P	P	V	A	L	I	K	V	G	K	G	E	K	V	L	E	I	G	H	E	T	V	L	F	R	H	D	K	R	F	E	H	P	C	G	L	A	I	L	V	E	D	T	L	S	E	G	E	I	K	E	R	V	E	K	I	N	K	L	V	F	D	R	V	G	.	.	.	.	.	.	Q	M	H	S	V	N	L	V	A
Template Known Secondary structure				S						S		T	T	S										S	S	G	G	G	S				S										T	T	S														T						T	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	.	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A
Query Conservation																																																					.
Alig confidence									.	.	.														.	.	.											.															.											.	.	.	.
Template Conservation									.	.	.														.	.	.											.																										.	.	.	.
Template Sequence		L	K	G	S	S	Q	D	.	.	.	A	A	T	F	A	K	A	V	A	T	A	R	E	.	.	.	V	T	D	L	P	F	I	L	I	G	.	T	P	E	Q	L	A	A	A	L	E	T	E	G	A	N	N	P	L	L	Y	A	A	T	A	D	.	.	.	.	N	Y	E	Q	M	V	E	L	A	K	K	Y	N	V
Template Known Secondary structure					T	T			.	.	.														.	.	.				S						S	.													G	G	G									T	T	.	.	.	.	T												T
Template Predicted Secondary structure									.	.	.														.	.	.											.																										.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I
Query Conservation
Alig confidence						.	.	.								.	.	.	.	.	.	.	.									.							.	.																				.	.	.	.	.	.	.	.									.	.
Template Conservation						.	.	.								.	.	.	.	.	.	.	.									.							.	.																				.	.	.	.	.	.	.	.									.	.
Template Sequence		P	L	T	V	.	.	.	S	A	K	G	L	D	A	.	.	.	.	.	.	.	.	L	A	E	L	V	Q	K	I	.	T	A	L	G	Y	K	.	.	N	L	I	L	D	P	Q	P	E	N	I	S	E	G	L	F	Y	Q	T	.	.	.	.	.	.	.	.	Q	I	R	R	L	A	I	K	.	.	K	L	F	R
Template Known Secondary structure						.	.	.			S	S				.	.	.	.	.	.	.	.									.			T	T			.	.									S	S										.	.	.	.	.	.	.	.									.	.	S			G
Template Predicted Secondary structure						.	.	.								.	.	.	.	.	.	.	.									.							.	.																				.	.	.	.	.	.	.	.									.	.
Template SS confidence
		202	.	.	.				.	.	.	.	210	.	.									.	.	.	.	.	.	.	220		.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.									.	.	.	.	250	.	.	.			.	.	.	.
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	G	V	S	N	V	S	F	S	F	R	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	G	Y	P	T	I	A	F	A	L	D	E	N	P	Y	Q	A	V	M	E	A	S	V	Y	I	A
Template Known Secondary structure		G	G		S		B							S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions