Job Description P13009 Confidence 25.11% Date Thu Jan 5 11:33:23 GMT 2012 Rank 457 Aligned Residues 199 % Identity 11% Template c2gn0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation) Resolution 1.70 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	T	P	Q	H	I	A	A	M	S	R	A	V	E	G	L	A	P	R	K	L	P	E	I	P	V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																														.					.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																														.					.	.	.	.	.
Template Sequence		P	V	A	I	E	D	I	L	E	A	K	K	R	L	A	G	K	I	Y	K	T	G	.	.	.	.	.	.	.	.	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	I	.	R	G	A	F	.	.	.	.	.	N	K	L	S	S	L	T	E	A	E	K
Template Known Secondary structure		S	S													T	T	T	S					.	.	.	.	.	.	.	.			B									T	S							G	G	G	S	G	G	G	B			.					.	.	.	.	.						S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																														.					.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.						.	.	.	.	.	.	.	70	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	G	A	Q	I	I	D	I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	R	F	L	N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K
Query Conservation
Alig confidence					.	.								.	.	.	.															.	.	.	.	.																																			.	.	.
Template Conservation					.	.								.	.	.	.															.	.	.	.	.																																			.	.	.
Template Sequence		R	K	G	.	.	V	V	A	C	S	A	G	.	.	.	.	N	H	A	Q	G	V	S	L	S	C	A	M	L	G	.	.	.	.	.	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	F	N	.	.	.	D	T	I	A	K	V	S	E
Template Known Secondary structure			T		.	.						S	S	.	.	.	.														T	.	.	.	.	.									T	T	S												S								S	S			.	.	.
Template Predicted Secondary structure					.	.								.	.	.	.															.	.	.	.	.																																			.	.	.
Template SS confidence
		75	.	.			.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																										.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																										.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		I	V	E	T	E	G	R	I	F	I	.	.	.	.	.	.	.	.	P	P	Y	D	D	P	K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	Y	D	.	.	.	.	.	.	V	D	N	V	I	V	P	I	G	G	G	G	.	.	.	.	.	.	.	.	L	I	A	G	I	A	I	A	I	K	S
Template Known Secondary structure												.	.	.	.	.	.	.	.		S	S	S	S																			T	T	.	.	.	.	.	.									S	S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																										.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.
		552	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	H	A	L	I	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	P	T	I	K	V	I	G
Template Known Secondary structure				T	T	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions