Job Description P13009 Confidence 99.92% Date Thu Jan 5 11:33:23 GMT 2012 Rank 27 Aligned Residues 213 % Identity 23% Template c2dzaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dihydropteroate synthase; PDBTitle: crystal structure of dihydropteroate synthase from thermus2 thermophilus hb8 in complex with 4-aminobenzoate Resolution 1.90 Å

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		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	C	R	L	S	G	L	E	P	L	N	I	G	E	D	S	L	F	V	N	V	G	E	R	T	N	V	T	G	S	A	K	F	K	R	L	I	K	E	E	K	Y	S	E	A	L	D	V	A	R	Q	Q	V	E	N	G	A	Q	I	I	D	I	N	M	D	E	G	M	L	D	A	E	A	A	M	V	R	F	L
Query Conservation
Alig confidence																.	.	.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																.	.	.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		V	R	T	L	W	L	R	D	R	A	L	D	L	D	.	.	.	R	V	R	L	L	G	.	V	L	N	L	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	E	R	A	R	E	M	V	A	E	G	A	D	I	L	D	L	G	A	E	S	.	.	.	.	.	.	.	.	L	L	P	V	L
Template Known Secondary structure								S	S	S					S	.	.	.	S						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.													T		S									.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.		.	.	.	.	.	.															40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		N	L	I	A	G	E	P	D	I	A	R	V	P	I	M	I	D	S	S	K	W	D	V	I	E	K	G	L	K	C	I	Q	G	K	G	I	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence							.	.	.	.																						.	.												.	.	.	.																							.							.	.	.	.
Template Conservation							.	.	.	.																						.	.												.	.	.	.																							.
Template Sequence		E	A	V	L	S	.	.	.	.	L	G	V	P	V	S	V	D	T	R	K	P	E	V	A	E	E	A	L	K	L	.	.	G	A	H	L	L	N	D	V	T	G	L	.	.	.	.	R	D	E	R	M	V	A	L	A	A	R	H	G	V	A	A	V	V	M	H	M	P	.	V	P	D	P	A	T	M	M	A	H
Template Known Secondary structure						T	.	.	.	.	T		S							S												.	.	T							T	T		S	.	.	.	.													T									S	.	S	S		T	T	T	G	G	G	G
Template Predicted Secondary structure							.	.	.	.																						.	.												.	.	.	.																							.
Template SS confidence
		97	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.
								494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I	S	G	G	V	S	N	V	S	F
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																.							.	.							.	.	.	.	.																									.	.
Template Conservation																							.							.	.							.	.	.	.	.																									.	.
Template Sequence		A	R	Y	R	D	V	V	A	E	V	K	A	F	L	E	A	Q	A	R	R	A	.	L	S	A	G	V	P	.	.	Q	V	V	L	D	P	.	.	.	.	.	G	F	G	F	G	K	L	L	E	H	N	L	A	L	L	R	R	L	D	E	I	V	A	L	.	.	G	H	P	V	L	V	G	L	S	R	K	R	T
Template Known Secondary structure					S	S																	.			T	T		S	.	.							.	.	.	.	.		T	T	S	S												T	T					T	T	.	.	S	S		B					T	T
Template Predicted Secondary structure																							.							.	.							.	.	.	.	.																									.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.			.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.
							568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	S	F	R	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y	Y	A	I	R	N	G	M	D	M	G	I	V	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.				.
Template Conservation										.
Template Sequence		I	G	E	L	S	G	V	E	.	D	P	A	Q	R	V	H	G	S	V	A	A	H	L	F	A	V	M	K	G	V	R	L	L	R	V	H
Template Known Secondary structure							T			.	S	G	G	G															T	T							S
Template Predicted Secondary structure										.
Template SS confidence
		236	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions