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Job DescriptionP13009
Confidence100.00%DateThu Jan 5 11:33:23 GMT 2012
Rank16Aligned Residues181
% Identity19%Templatec1xrsB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   668.670.........680.........690.........700.........710.........720.........730.........740.......
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Query Sequence  VKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEQGKTNG
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Template Sequence  LKNNERSAEAAKQIALKMGLEE. . . . . . PSVVMQQSLDEEFTFFVVYGNEILSMEETDEYI. . . . . . . . . . . KENIGRKI
Template Known Secondary structure  S
SSTTSS

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   42.......50.........60... ......70.........80.........90...... ...100....
 
   748.750.........760.........770.... .....780.........790.........800.........810 .....
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Query Sequence  KMVIATVKGDVHDIGKNIVGVVLQCNN. . . . . . . . . YEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPS. . . LDEMV
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Template Sequence  VVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMT
Template Known Secondary structure  BTT



STT
BTTB

GGG
TT

SSB
TT
S



TTS
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   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   816...820...... ...830.........840.........850.........860.........870.
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Query Sequence  NVAKEMERQGF. . TIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALL
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Template Sequence  HLIELLEAEGLRDRFVLLCGGPRINNEIAKELGYDAG. . . . . . FGPGRFADDVATFAV
Template Known Secondary structure  TT
GGGS
TT

TTT
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   202.......210.........220.........230........ .240.........250...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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