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Job Description | P13009 | Confidence | 30.31% | Date | Thu Jan 5 11:33:23 GMT 2012 |
Rank | 398 | Aligned Residues | 116 |
% Identity | 12% | Template | c1t3nB_ |
PDB info |
PDB header:replication/dna | Chain: B: PDB Molecule:polymerase (dna directed) iota; |
PDBTitle: structure of the catalytic core of dna polymerase iota in2 complex with dna and dttp
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Resolution | 2.30 Å |
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444 | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | L | K | C | I | Q | G | K | G | I | V | N | S | I | S | M | K | E | G | V | D | A | F | I | H | H | A | K | L | L | R | R | Y | G | A | A | V | V | V | M | A | F | D | E | Q | G | Q | A | D | T | R | A | R | K | I | E | I | C | R | R | A | Y | K | I | L | T | E | E | V | G | F | P | P | E | D | I | I | F | D | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | K | E | K | C | P | Q | L | V | L | V | N | G | E | D | L | T | R | Y | R | E | M | S | Y | K | V | T | E | L | L | E | E | F | S | P | V | V | E | R | L | G | F | D | E | N | F | V | D | L | T | E | M | V | E | K | R | L | Q | Q | L | Q | S | D | . |
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E | L | S | A | V | T | V | S | G | H | V | Y | N | N |
Template Known Secondary structure |   |
G | G | G | S | S | T | T |
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| S | S | . | . | . | G | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
504 | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | |
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. | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 |
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524 | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | |
. | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | I | F | A | V | A | T | G | I | E | E | H | N | N | Y | A | Q | D | F | I | G | A | C | E | . |
D | I | K | R | E | L | P | H | A | L | I | S | G | G | V | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | S | I | N | L | L | D | V | L | H | I | R | L | L | V | G | S | Q | I | A | A | E | M | R | E | A | M | Y | N | Q | L | . |
G | L | T | G | C | A | G | V | A |
Template Known Secondary structure |   |
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| T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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581 | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | |
. | . | . | . | . | . | . | . | 620 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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