 |
Job Description | P13009 | Confidence | 64.88% | Date | Thu Jan 5 11:33:23 GMT 2012 |
Rank | 196 | Aligned Residues | 65 |
% Identity | 18% | Template | c1o4uA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; |
PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
|
Resolution | 2.50 Å |
|
 |
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | S | T | K | A | L | V | E | G | G | A | D | L | I | L | I | E | T | V | F | D | T | L | N | A | K | A | A | V | F | A | V | K | T | E | F | E | A | L | G | V | E | L | P | I | M | I | S | G | T | I | T | D | A | S | G | R | T | L | S | G | Q | T | T | E | A | F | Y | N | S | L | R | H | A | E | A | L | T | F |
Query Conservation |   |
  |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|   |   |
|   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   | . |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |
|   |
|   |
|
|
|
|
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
L | E | D | A | L | R | A | V | E | A | G | A | D | I | V | M | L | D | N | . |
L | S | P | E | E | V | K | D | I | S | R | R | I | K | D | I | . |
. |
. |
. |
N | P | N | V | I | V | E | V | S | G | G | I | T | E | E | N | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | Y | D | F | E | T | V | D | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
| T | T | S |  |  |  |  |  |  |
|
|
| T | T | T | G | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | |
|
|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 250 | . | . | . |
  |
  |   |
244 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
G | L |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
S | S |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
254 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|