Job Description P13009 Confidence 31.42% Date Thu Jan 5 11:33:23 GMT 2012 Rank 382 Aligned Residues 152 % Identity 17% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		442	.	.	.	.	.	.	.	450	.	.	.		.				.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure														.		.	.	.
Query SS confidence														.		.	.	.
Query Sequence		E	K	G	L	K	C	I	Q	G	K	G	I	.	V	.	.	.	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E
Query Conservation														.		.	.	.
Alig confidence														.		.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		E	S	A	M	H	R	L	G	G	A	V	I	G	F	A	E	A	S	T	S	S	V	K	K	G	.	E	S	L	R	D	T	I	K	T	V	E	Q	Y	C	D	V	I	V	I	R	H	P	K	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	R	L	A	A	E	V	A	E	V	P	.	.
Template Known Secondary structure								T	T							S		G	G	G	S	G	G	G	G	T	.											T	T	T		S							S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T		S	S		.	.
Template Predicted Secondary structure																											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																.	.	.	.	.	.	.	120	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I	S	G	G	V	S	N	V	S	F	S	F	R	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y	Y	A	I	R	N	G	M	D	M	G	I	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																															.
Template Conservation		.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																															.
Template Sequence		.	.	.	.	.	.	.	V	I	N	A	G	D	G	S	N	Q	H	P	T	Q	T	L	L	D	L	Y	T	I	K	K	E	F	.	.	.	.	.	.	.	.	.	G	R	I	D	G	L	K	I	G	L	L	G	D	L	K	Y	G	R	T	V	H	S	L	A	E	A	L	T	F	Y	.	D	V	E	L	Y	L	I
Template Known Secondary structure		.	.	.	.	.	.	.							T	T	S																	S	.	.	.	.	.	.	.	.	.	S		S	S	S							S		T	T	T											G	G	G	S	.
Template Predicted Secondary structure		.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																															.
Template SS confidence
									125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	Q	L	A	I	Y	D	D	L	P	A	E	L	R	D	A	V	E	D	V	I	L	N	R	R	D	D	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	E	L	L	R	M	P	R	H	I	V	E	E	L	R	E	K	G	M	K	V	V	E	T	T	T	L	E	D	V
Template Known Secondary structure				G	G	G													T	T							S		T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions