Return to main results Retrieve Phyre Job Id

Job DescriptionP13009
Confidence22.91%DateThu Jan 5 11:33:23 GMT 2012
Rank497Aligned Residues90
% Identity10%Templatec1j0yD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:beta-amylase; PDBTitle: beta-amylase from bacillus cereus var. mycoides in complex2 with glucose
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   466...470.........480. ........490.........500.........510.........520.........530.........540...
Predicted Secondary structure 


..





















Query SS confidence 















. .





























































Query Sequence  FIHHAKLLRRYGAAVV. . VMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFI
Query Conservation        
 







.. 
  

 
 
 
 
 
  

 
         
    




 
  

 

 

    
  

Alig confidence 















..


























.







....







.





....


Template Conservation 
  
            


 

 
       
 
  

 

   
.   

   ....




   .      .... 
 
Template Sequence  YSHLLDAFKSAKLDVTFTCLEMTDKGSYPEYSMPKTLVQNIATLA. NEKGIVLN. . . . GENALSIG. NEEEYK. . . . RVA
Template Known Secondary structure  T

TT





TTT


.T

....
SS


.S....
Template Predicted Secondary structure 










.


....






.
....
Template SS confidence 















































































   313......320.........330.........340.........350....... ..360..... ....370... ...... 380..
 
   544.....550.........560........
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  GACEDIKRELPHALISGGVSNVSFS
Query Conservation   


 

  

   
 








Alig confidence 



..



.













Template Conservation      ..    .  

 

  
    
Template Sequence  EMAF. . NYNF. AGFTLLRYQDVMYN
Template Known Secondary structure  ..TT
.SS
T
Template Predicted Secondary structure  ..



.


Template SS confidence 
























   383... ...390 .........400....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions