Job Description P13009 Confidence 81.04% Date Thu Jan 5 11:33:23 GMT 2012 Rank 143 Aligned Residues 139 % Identity 16% Template c1fvoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine transcarbamylase; PDBTitle: crystal structure of human ornithine transcarbamylase complexed with2 carbamoyl phosphate Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		442	.	.	.	.	.	.	.	450	.	.	.				.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		E	K	G	L	K	C	I	Q	G	K	G	I	.	.	.	V	N	S	I	S	M	K	E	G	V	D	A	F	I	H	H	A	K	L	L	R	R	Y	G	A	A	V	V	V	M	A	F	D	E	Q	G	Q	A	D	T	R	A	R	K	I	E	I	C	R	R	A	Y	K	I	L	T	E	E	V	G	F	P	P	E	D
Query Conservation														.	.	.
Alig confidence														.	.	.										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		E	T	G	F	A	L	L	G	G	H	P	C	F	L	T	T	Q	D	I	H	L	G	V	N	.	E	S	L	T	D	T	A	R	V	L	S	S	M	A	D	A	V	L	A	R	V	Y	K	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	T	L	A	K	E	A	S	I	P	.	.	.
Template Known Secondary structure								T	T								S	T	T	S		T	T	T	S	.			S												S							S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S		.	.	.
Template Predicted Secondary structure																										.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.																.	.	.	150	.	.	.	.	.	.	.	.
		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	F	D	P	N	I	F	A	V	A	T	G	I	E	E	H	N	N	Y	A	Q	D	F	I	G	A	C	E	D	I	K	R	E	L	P	H	A	L	I	S	G	G	V	S	N	V	S	F	S	F	R	G	N	D	P	V	R	E	A	I	H	A	V	F	L	Y	Y	A	I	R	N	G	M	D	M	G	I	V	N
Query Conservation
Alig confidence		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.														.				.													.
Template Conservation		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.														.				.													.
Template Sequence		.	.	.	.	.	.	I	I	N	G	L	S	D	.	L	Y	H	P	I	Q	I	L	A	D	Y	L	T	L	Q	E	H	Y	.	.	.	.	.	.	.	.	.	S	S	L	K	G	L	T	L	S	W	I	G	D	.	G	N	N	.	I	L	H	S	I	M	M	S	A	A	K	F	.	G	M	H	L	Q	A	A	T
Template Known Secondary structure		.	.	.	.	.	.				S			S	.	S																		.	.	.	.	.	.	.	.	.	S			T	T							S		.	S			.							T	T	G	G	G	G	.	T
Template Predicted Secondary structure		.	.	.	.	.	.								.																			.	.	.	.	.	.	.	.	.														.				.													.
Template SS confidence
								159	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.		200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	L	A	I	Y	D	D	L	P	A	E	L	R	D	A	V	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	G	Y	E	P	D	A	S	V	T	K	L	A	E	Q	Y	A	K	E
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions