Job Description P0AC78 Confidence 23.34% Date Thu Jan 5 11:17:29 GMT 2012 Rank 1 Aligned Residues 136 % Identity 15% Template c3aqpB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:probable secdf protein-export membrane protein; PDBTitle: crystal structure of secdf, a translocon-associated membrane protein,2 from thermus thrmophilus Resolution 3.30 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		S	T	L	I	G	F	T	V	I	W	I	L	L	E	T	T	Q	G	K	T	H	P	I	S	P	V	T	A	L	W	I	I	A	I	P	L	M	D	M	V	A	I	M	Y	R	.	.	.	R	L	R	K	G	M	S	P	F	S	P	D	R	Q	H	I	H	H	L	I	M	R	A	G	F	T	S	R	Q	A	F	V
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		G	L	L	Y	T	S	A	L	I	L	G	L	L	S	G	L	G	A	T	L	T	L	P	G	I	A	G	L	V	L	T	L	G	A	A	V	D	G	N	V	L	S	F	E	R	I	K	E	E	L	R	A	G	K	K	L	R	Q	.	.	.	.	.	.	.	.	.	A	I	P	E	G	F	R	H	S	T	L	T	I
Template Known Secondary structure																																																					T	T						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.										.	.	.	.	.	.	.	.	370	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	L	A	A	A	L	L	A	S	I	G	V	L	A	E	Y	S	H	F	V	P	E	W	V	M	L	V	L	F	L	L	A	F	F	L	Y	G	Y	C	I	K	R	A	W	K	V	A	R	F	I	K	R	V	K	R	R	L	R	R	N	R	G	G	S	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	V	N	I	A	H	L	L	A	A	A	A	L	Y	Q	Y	A	T	G	P	V	R	G	F	A	V	I	L	A	I	G	V	V	A	S	V	F	S	N	L	V	F	S	R	H	L	L	E	R	L	A	D	R	G	E	I	R	P	P	M	W	L	V	D	P	R	F
Template Known Secondary structure																		T			T																																			T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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