Job Description P0AC78 Confidence 2.25% Date Thu Jan 5 11:17:29 GMT 2012 Rank 45 Aligned Residues 85 % Identity 13% Template c2vv5D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:small-conductance mechanosensitive channel; PDBTitle: the open structure of mscs Resolution 3.45 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	L	L	T	V	S	T	D	L	I	S	I	F	L	F	T	T	L	F	L	F	F	A	R	K	V	A	K	K	V	G	L	V	D	K	P	N	F	R	K	R	H	Q	G	L	I	P	L	V	G	G	I	S	V	Y	A	G	I	C	F	T	F	G	I	V	D	Y	Y	I	P	H	A	S	L	Y	L	A	C	A
Query Conservation
Alig confidence																																.	.	.	.	.
Template Conservation																																.	.	.	.	.
Template Sequence		V	N	I	V	A	A	L	A	I	I	I	V	G	L	I	I	A	R	M	I	S	N	A	V	N	R	L	M	I	S	.	.	.	.	.	R	K	I	D	A	T	V	A	D	F	L	S	A	L	V	R	Y	G	I	I	A	F	T	L	I	A	A	L	G	R	V	G	V	Q	T	A	S	V	I	A	V	L	G	A	A
Template Known Secondary structure		S																														.	.	.	.	.			S																											T	T	T			S	T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		81	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	L	V	F	I	G	A	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	V	V	G	L	A	L	Q	G
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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