Job Description P0AC78 Confidence 3.91% Date Thu Jan 5 11:17:29 GMT 2012 Rank 19 Aligned Residues 28 % Identity 21% Template c2rddB_ PDB info PDB header:membrane protein/transport protein Chain: B: PDB Molecule:upf0092 membrane protein yajc; PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix. Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	F	L	L	A	F	F	L	Y	G	Y	C	I	K	R	A	W	K	V	A	R	F	I	K	R	V	K	R	R	L	R	R	N	R	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		I	L	M	L	V	V	F	G	L	I	F	Y	F	M	.	.	.	.	.	.	.	.	I	L	R	P	Q	Q	K	R	T	K	E	H	K	K
Template Known Secondary structure																.	.	.	.	.	.	.	.	T												T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.									.	.	40	.	.	.	.	.	.	.	.	.	50	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions