Job Description P0AC78 Confidence 4.93% Date Thu Jan 5 11:17:29 GMT 2012 Rank 13 Aligned Residues 158 % Identity 9% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	L	A	I	W	C	F	A	M	I	A	A	I	L	P	Y	I	M	L	N	L	G	I	L	G	R	R	Y	K	V	F	M	G	D	A	G	S	T	L	I	G	F	T	V	I	W	I	L	L	E	T	T	Q	G	K	T	H	P	I	S	P	V	T	A	L	W	I	I	A	I	P	L	M	D	M	V	A	I	M	.
Query Conservation																																																																																	.
Alig confidence																							.	.	.	.	.	.	.																																																				.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	.	.	.	.	.	.	.	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E
Template Known Secondary structure																						T	.	.	.	.	.	.	.	T	T	T	T	T	T	T	T	T																T			S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
				263	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.										.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.					.																																														.	.	.	.	.	.	.	.	.
Query SS confidence		.	.					.																																														.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Y	R	R	L	.	R	K	G	M	S	P	F	S	P	D	R	Q	H	I	H	H	L	I	M	R	A	G	F	T	S	R	Q	A	F	V	L	I	T	L	A	A	A	L	L	A	S	I	G	V	L	.	.	.	.	.	.	.	.	.	A	E	Y	S	H	F	V	P	E	W	V	M	L	V	L	F	L	L	A
Query Conservation		.	.					.																																														.	.	.	.	.	.	.	.	.
Alig confidence		.	.					.									.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	.	.	.	.	.	.	.	.	.	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A
Template Known Secondary structure										T				S			.	.	.	.	.	.	.	.	.					T																T	T	T	S	T	T	T	T				G	G	G																						T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.										430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	L	Y	G	Y	C	I	K	R	A	W	K	V	A	R	F	I	K	R	V	K	R	R	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	L	T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H
Template Known Secondary structure		T	T									S															T
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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