|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | Q | Q | D | I | E | Q | V | V | K | A | V | L | L | K | M | Q | S | S | D | T | P | S | A | A | V | H | E | M | G | V | F | A | S | L | D | D | A | V | A | A | A | K | V | A | Q | Q | G | L | K | . |
. |
S | V | A | M | R | Q | L | A | I | A | A | I | R | E | A | G | E | K | H | A | R | D | L | A | E | L | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   | . | . |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
I | G | G | R | W | K | D | S | A | G | G | A | T | F | D | V | Y | N | P | A | T | G | S | V | I | A | K | V | P | S | X | P | E | E | D | V | V | A | A | V | E | A | G | Q | S | A | L | R | L | T | N | P | W | P | I | E | T | R | R | K | W | L | E | D | I | R | D | G | L | K | E | N | R | E | E | I | G | R | I | L |
Template Known Secondary structure |   |
 | T | T |  |  |  |
|
|
| T | T |
|  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | |
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
|
|
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | S | E | T | G | M | G | R | V | E | D | . |
. |
K | F | A | K | N | V | A | Q | A | R | G | T | P | G | V | E | C | L | S | P | . |
. |
. |
Q | V | L | T | G | D | N | G | L | T | L | I | E | N | A | P | W | G | V | V | A | S | V | T | P | S | T | N | P | A | A | T | V | I | N | N | A | I | S | L | I | A | A | G |
Query Conservation |   |
  |   |
|   |
|
|   |   |   |
|   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
Template Sequence |   |
C | X | E | H | G | K | P | W | K | E | A | Q | G | E | V | D | Y | A | A | G | F | F | D | Y | C | A | K | H | I | S | A | L | D | S | H | T | I | P | E | K | P | K | D | C | T | W | T | V | H | Y | R | P | V | G | V | T | G | L | I | V | P | W | N | F | P | I | G | X | I | A | K | K | L | S | A | A | L | A | A | G |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
|
|  |  |
| S |
|
| G | G | G |
|  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
|
| S | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
230 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
Query Sequence |   |
N | S | V | I | F | A | P | H | P | A | A | K | K | V | S | Q | R | A | I | T | L | L | N | Q | A | I | V | A | A | G | G | P | E | N | L | L | V | T | V | A | N | P | D | I | E | T | A | Q | R | L | F | K | F | P | G | I | G | L | L | V | V | T | G | G | E | A | V | V | E | A | A | R | K | H | T | N | . |
. |
. |
K |
Query Conservation |   |
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |
|   |   |   | . | . | . | . |
|   |   |
|
|
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
C | P | S | V | I | K | P | A | S | E | T | P | L | T | X | I | A | F | F | S | V | . |
. |
. |
. |
X | D | K | L | D | L | P | D | G | X | V | N | L | V | X | G | K | A | S | V | I | G | K | V | L | C | E | H | K | D | V | P | X | L | S | F | T | G | S | T | E | V | G | R | K | L | I | V | D | T | A | E | Q | V | K |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  | . | . | . | . |  | T | T | T | T |
|
| T | T | S |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
  |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | |
|
|
300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | I | A | A | G | A | G | N | P | P | V | V | V | D | E | T | A | D | L | A | R | A | A | Q | S | I | V | K | G | A | S | F | D | N | N | I | I | C | A | D | E | K | V | L | I | V | V | D | S | V | A | D | E | L | M | R | L | M | E | G | Q | H | A | V | K | L | T | A | . |
. |
. |
E | Q | A | Q | Q | L | Q | P |
Query Conservation |   |
|   |   |   |
|
|
|
|   |   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|
Template Sequence |   |
K | L | A | L | E | L | G | G | N | A | P | F | I | V | F | D | D | A | D | L | E | A | A | A | D | N | L | I | A | N | K | F | R | G | G | G | Q | T | C | V | C | A | N | R | I | F | V | H | E | K | V | A | D | A | F | G | Q | K | L | A | E | R | V | N | K | X | T | V | G | D | G | X | N | D | G | I | D | I | G | P |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |
| S | S | S | S |
|
|  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| B | S |
| T | T | S | T | T |
| S | B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
  |
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | |
|
|
|
340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | L | L | K | N | I | D | E | R | G | K | G | T | V | S | R | D | W | V | G | R | D | A | G | K | I | A | A | A | I | G | L | . |
. |
. |
. |
K | V | P | Q | E | T | R | L | L | F | V | E | T | T | A | E | H | P | F | A | V | T | E | L | M | M | P | V | L | P | V | V | R | V | A | N | V | A | D | A | I | A | L | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . |   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
Template Sequence |   |
L | I | N | K | Q | G | F | D | K | V | K | R | H | L | Q | D | A | L | . |
. |
D | K | G | A | S | L | V | A | G | K | Q | P | A | E | L | G | D | G | L | F | F | P | P | T | V | V | Q | G | V | D | R | E | X | C | C | Y | Q | E | E | T | F | G | P | L | V | P | X | A | L | F | R | T | E | E | E | V | I | D | A | G |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  | T | T |
|  |  |  |  | S |
|
| G | G | G |
|
| S | S | S |
|
|
|
|  |  |  |  |
|
|
| T | T | S |  |  |  |  | S |
|
|
| S | S |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | |
|
. | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | L | E | G | G | C | H | H | T | A | A | M | H | S | R | N | I | E | N | M | N | Q | M | A | N | A | I | D | T | S | I | F | V | K | N | G | P | C | I | A | G | L | G | L | G | G | E | G | W | T | T | M | T | I | T | T | P | T | G | E | G | V | T | S | A | R | T | F | V | R | L | R | R | C | V |
Query Conservation |   |
|   |   |   |   |
|
|
|   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
| . | . |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |   | . |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|   |
|   |   |   | . |
|   |   |
|   |   |   |   |
|   |   |
|   |
|   |
Template Sequence |   |
N | D | T | E | F | G | L | . |
. |
A | S | Y | V | F | T | A | D | A | E | R | A | Q | R | V | A | A | G | L | R | F | G | H | V | G | W | N | T | G | T | . |
G | P | T | P | E | A | P | F | G | G | X | K | A | S | G | I | G | R | E | G | . |
G | L | E | G | L | F | E | F | V | E | A | Q | T | V | P |
Template Known Secondary structure |   |
T |
| S | S |
|
| S | . | . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  | S |
|
|
| . |
|
|
| T | T | S |
| B |
|
| S | G | G | G |  |  | S |
| B | S | . |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
408 | . | 410 | . | . | . | . | |
|
. | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | |
. | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | |
. | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . |
  |