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Job DescriptionP77445
Confidence100.00%DateThu Jan 5 12:29:23 GMT 2012
Rank16Aligned Residues449
% Identity14%Templatec3rh9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei
Resolution2.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50. ........60.........70........
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Query Sequence  MNQQDIEQVVKAVLLKMQSSDTPSAAVHEMGVFASLDDAVAAAKVAQQGLK. . SVAMRQLAIAAIREAGEKHARDLAELA
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Template Sequence  IGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREEIGRIL
Template Known Secondary structure  TT


TT

TTT






SSS


T
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   7980......... 90.........100......... 110.........120.........130.........140.........150...
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Query Sequence  VSETGMGRVED. . KFAKNVAQARGTPGVECLSP. . . QVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAG
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Template Sequence  CXEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAG
Template Known Secondary structure 


GGGG


S

GGG


S

SSSTTT
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   154.....160.........170.........180.........190.........200.........210.........220......... 230
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Query Sequence  NSVIFAPHPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGEAVVEAARKHTN. . . K
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Template Sequence  CPSVIKPASETPLTXIAFFSV. . . . XDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTAEQVK
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TTS
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TTS

S

TT

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   174.....180.........190.... .....200.........210.........220.........230.........240.........
 
   231........240.........250.........260.........270.........280.........290......... 300.......
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Query Sequence  RLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLIVVDSVADELMRLMEGQHAVKLTA. . . EQAQQLQP
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Template Sequence  KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGP
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TTS
GGGG
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   250.........260.........270.........280.........290.........300.........310.........320.........
 
   308.310.........320.........330......... 340.........350.........360.........370.........380...
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Query Sequence  VLLKNIDERGKGTVSRDWVGRDAGKIAAAIGL. . . . KVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALA
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Template Sequence  LINKQGFDKVKRHLQDAL. . DKGASLVAGKQPAELGDGLFFPPTVVQGVDREXCCYQEETFGPLVPXALFRTEEEVIDAG
Template Known Secondary structure 
S
..TT
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   330.........340....... ..350.........360.........370.........380.........390.........400.......
 
   384.....390.........400.........410.........420.........430.........440.........450.........
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Query Sequence  VKLEGGCHHTAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSARTFVRLRRCV
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Template Sequence  NDTEFGL. . ASYVFTADAERAQRVAAGLRFGHVGWNTGT. GPTPEAPFGGXKASGIGREG. GLEGLFEFVEAQTVP
Template Known Secondary structure  T
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   408.410.... .....420.........430.........440.... .....450.........460.... .....470.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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