Job Description P77445 Confidence 100.00% Date Thu Jan 5 12:29:23 GMT 2012 Rank 24 Aligned Residues 452 % Identity 16% Template c3r31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		M	N	Q	Q	D	I	E	Q	V	V	K	A	V	L	L	K	M	Q	S	S	D	T	P	S	A	A	V	H	E	M	G	V	F	A	S	L	D	D	A	V	A	A	A	K	V	A	Q	Q	G	L	K	.	.	S	V	A	M	R	Q	L	A	I	A	A	I	R	E	A	G	E	K	H	A	R	D	L	A	E	L	A
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		I	D	G	D	Y	V	E	D	N	T	G	T	P	F	E	S	I	F	P	A	T	G	E	M	I	A	K	L	H	A	A	T	P	A	I	V	E	R	A	I	A	S	A	K	R	A	Q	K	E	W	A	A	M	S	P	M	A	R	G	R	I	L	K	R	A	A	D	I	M	R	E	R	N	D	A	L	S	T	L	E
Template Known Secondary structure			T	T						T	T	S								T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		V	S	E	T	G	M	G	R	V	E	D	K	F	A	K	N	V	A	Q	A	R	G	T	P	G	V	E	C	L	.	.	.	.	.	S	P	Q	V	L	T	G	D	N	G	L	T	L	I	E	N	A	P	W	G	V	V	A	S	V	T	P	S	T	N	P	A	A	T	V	I	N	N	A	I	S	L	I	A	A	G
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence		T	L	D	T	G	K	P	I	Q	E	T	I	V	A	D	P	T	S	G	A	D	A	F	E	F	F	G	G	I	A	P	S	A	L	N	G	D	Y	I	P	L	G	G	D	F	A	Y	T	K	R	V	P	L	G	V	C	V	G	I	G	A	W	N	Y	P	Q	Q	I	A	C	W	K	A	A	P	A	L	V	A	G
Template Known Secondary structure																S																			T								S	S	S										S								S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		N	S	V	I	F	A	P	H	P	A	A	K	K	V	S	Q	R	A	I	T	L	L	N	Q	A	I	V	A	A	G	G	P	E	N	L	L	V	T	V	A	N	P	D	I	E	T	A	Q	R	L	F	K	F	P	G	I	G	L	L	V	V	T	G	G	E	A	V	V	E	A	A	R	K	H	T	N	.	.	.	K
Query Conservation																																																																														.	.	.
Alig confidence																										.	.	.	.														.																																			.	.	.
Template Conservation																										.	.	.	.														.
Template Sequence		N	A	M	V	F	K	P	S	E	N	T	P	L	G	A	L	K	I	A	E	I	L	I	E	.	.	.	.	A	G	L	P	K	G	L	F	N	V	I	Q	G	.	D	R	D	T	G	P	L	L	V	N	H	P	D	V	A	K	V	S	L	T	G	S	V	P	T	G	R	K	V	A	A	A	A	A	G	H	L	K
Template Known Secondary structure										T	T	S		S												.	.	.	.	T	T			T	T	S							.		T	T							T		T	T								S															T	T
Template Predicted Secondary structure																										.	.	.	.														.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	L	I	A	A	G	A	G	N	P	P	V	V	V	D	E	T	A	D	L	A	R	A	A	Q	S	I	V	K	G	A	S	F	D	N	N	I	I	C	A	D	E	K	V	L	I	V	V	D	S	V	A	D	E	L	M	R	L	M	E	G	Q	H	A	V	K	L	T	A	.	.	.	E	Q	A	Q	Q	L	Q	P
Query Conservation																																																																							.	.	.
Alig confidence																																																																							.	.	.
Template Conservation
Template Sequence		H	V	T	M	E	L	G	G	K	S	P	M	I	V	F	D	D	A	D	I	E	S	A	V	G	G	A	M	L	G	N	F	Y	S	S	G	Q	V	C	S	N	G	T	R	V	F	V	Q	K	K	A	K	A	R	F	L	E	N	L	K	R	R	T	E	A	M	I	L	G	D	P	L	D	Y	A	T	H	L	G	P
Template Known Secondary structure																	T	T	S														T	S							T	T								G	G	G																	B			T	T	S	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.						.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		V	L	L	K	N	I	D	E	R	G	K	G	T	V	S	R	D	W	V	G	R	D	A	G	K	I	A	A	A	I	G	L	K	V	P	.	.	.	.	.	Q	E	T	R	L	L	F	V	E	T	T	A	E	H	P	F	A	V	T	E	L	M	M	P	V	L	P	V	V	R	V	A	N	V	A	D	A	I	A	L
Query Conservation																																					.	.	.	.	.
Alig confidence																		.																			.	.	.	.	.
Template Conservation																		.
Template Sequence		L	V	S	K	A	Q	Q	E	K	V	L	S	Y	I	E	K	.	G	K	A	E	G	A	T	L	I	T	G	G	G	I	P	N	N	V	A	G	E	G	A	Y	V	Q	P	T	V	F	A	D	V	T	D	D	M	T	I	A	R	E	E	I	F	G	P	V	M	C	V	L	D	F	D	D	E	D	E	V	L	A	R
Template Known Secondary structure		B	S															.					T								S			S	S			S	S	S	B												T	T	S					S			S	S	S
Template Predicted Secondary structure																		.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	L	E	G	G	C	H	H	T	A	A	M	H	S	R	N	I	E	N	M	N	Q	M	A	N	A	I	D	T	S	I	F	V	K	N	G	P	C	I	A	G	L	G	L	G	G	E	G	W	T	T	M	T	I	T	T	P	T	G	E	G	V	T	S	A	R	T	F	V	R	L	R	R	C	V	L	V	D
Query Conservation
Alig confidence										.	.																																				.																.													.
Template Conservation										.	.																																				.																.													.
Template Sequence		A	N	A	T	E	F	G	L	.	.	A	G	G	V	F	T	A	D	L	A	R	A	H	R	V	V	D	G	L	E	A	G	T	L	W	I	N	T	Y	N	L	C	P	V	E	.	I	P	F	G	G	S	K	Q	S	G	F	G	R	E	N	.	S	A	A	A	L	E	H	Y	S	E	L	K	.	T	V	Y	V	S
Template Known Secondary structure					S	S			S	.	.							S												S			S					S	S						T	T	.	S		B					T	T					B	S	.	T	G	G	G	G	G	G	S					.
Template Predicted Secondary structure										.	.																																				.																.													.
Template SS confidence
		413	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.		.	.	.	.	.
		463
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		488