Job Description P77445 Confidence 100.00% Date Thu Jan 5 12:29:23 GMT 2012 Rank 28 Aligned Residues 453 % Identity 18% Template c3k2wD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase; PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		M	N	Q	Q	D	I	E	Q	V	V	K	A	V	L	L	K	M	Q	S	S	D	T	P	S	A	A	V	H	E	M	G	V	F	A	S	L	D	D	A	V	A	A	A	K	V	A	Q	Q	G	L	K	.	.	S	V	A	M	R	Q	L	A	I	A	A	I	R	E	A	G	E	K	H	A	R	D	L	A	E	L	A
Query Conservation																																																					.	.
Alig confidence																																																					.	.
Template Conservation
Template Sequence		I	G	G	Q	Y	V	P	S	N	E	S	D	T	I	D	I	L	S	P	S	T	G	K	V	I	G	E	I	P	A	G	C	K	A	D	A	E	N	A	L	E	V	A	Q	A	A	Q	K	A	W	A	K	L	T	A	R	T	R	Q	N	M	L	R	T	F	A	N	K	I	R	E	N	K	H	I	L	A	P	M	L
Template Known Secondary structure			T	T						S	S									T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.						.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		V	S	E	T	G	M	G	R	V	E	D	K	F	A	K	N	V	A	Q	A	R	G	T	P	G	V	E	C	L	S	P	Q	V	.	.	.	.	.	L	T	G	D	N	G	L	T	L	I	E	N	A	P	W	G	V	V	A	S	V	T	P	S	T	N	P	A	A	T	V	I	N	N	A	I	S	L	I	A	A	G
Query Conservation																																			.	.	.	.	.
Alig confidence																																			.	.	.	.	.
Template Conservation
Template Sequence		V	A	E	Q	G	K	L	L	S	V	A	E	M	E	V	D	V	T	A	T	F	I	D	Y	G	C	D	N	A	L	T	I	E	G	D	I	L	P	S	D	N	Q	D	E	K	I	Y	I	H	K	V	P	R	G	V	V	V	G	I	T	A	W	N	F	P	L	A	L	A	G	R	K	I	G	P	A	L	I	T	G
Template Known Secondary structure																													T	T	T	T									S	S	T	T											S								S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		N	S	V	I	F	A	P	H	P	A	A	K	K	V	S	Q	R	A	I	T	L	L	N	Q	A	I	V	A	A	G	G	P	E	N	L	L	V	T	V	A	N	P	D	I	E	T	A	Q	R	L	F	K	F	P	G	I	G	L	L	V	V	T	G	G	E	A	V	V	E	A	A	R	K	H	T	N	.	.	.	K
Query Conservation																																																																														.	.	.
Alig confidence																										.	.	.	.																																																	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		N	T	M	V	L	K	P	T	Q	E	T	P	L	A	T	T	E	L	G	R	I	A	K	E	.	.	.	.	A	G	L	P	D	G	V	L	N	V	I	N	G	T	G	S	V	V	G	Q	T	L	C	E	S	P	I	T	K	M	I	T	M	T	G	S	T	V	A	G	K	Q	I	Y	K	T	S	A	E	Y	M	T
Template Known Secondary structure										S	S	S														.	.	.	.	T	T			T	T	T						S		T	T	T									T	T								S													T	T	T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	L	I	A	A	G	A	G	N	P	P	V	V	V	D	E	T	A	D	L	A	R	A	A	Q	S	I	V	K	G	A	S	F	D	N	N	I	I	C	A	D	E	K	V	L	I	V	V	D	S	V	A	D	E	L	M	R	L	M	E	G	Q	H	A	V	K	L	T	A	.	.	.	E	Q	A	Q	Q	L	Q	P
Query Conservation																																																																							.	.	.
Alig confidence																																																																							.	.	.
Template Conservation
Template Sequence		P	V	M	L	E	L	G	G	K	A	P	M	V	V	M	D	D	A	D	L	D	K	A	A	E	D	A	L	W	G	R	F	A	N	C	G	Q	V	C	T	C	V	E	R	L	Y	V	H	A	S	V	Y	D	E	F	M	A	K	F	L	P	L	V	K	G	L	K	V	G	D	P	M	D	A	D	S	Q	M	G	P
Template Known Secondary structure																	T	T	S															G	G	G	G		S	T	T	S								G	G	G														T			B			T	T	S	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340							.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		V	L	L	K	N	I	D	E	R	G	K	G	T	V	S	R	D	W	V	G	R	D	A	G	K	I	A	A	A	I	G	L	K	.	.	.	.	.	.	V	P	Q	E	T	R	L	L	F	V	E	T	T	A	E	H	P	F	A	V	T	E	L	M	M	P	V	L	P	V	V	R	V	A	N	V	A	D	A	I	A
Query Conservation																																			.	.	.	.	.	.
Alig confidence																	.																		.	.	.	.	.	.
Template Conservation																	.
Template Sequence		K	C	N	Q	R	E	I	D	N	I	D	H	I	V	H	.	E	A	I	K	Q	G	A	T	V	A	T	G	G	K	T	A	T	V	E	G	F	E	G	G	C	W	Y	E	P	T	V	L	V	D	V	K	Q	D	N	I	V	V	H	E	E	T	F	G	P	I	L	P	I	V	K	V	S	S	M	E	Q	A	I	E
Template Known Secondary structure			S														.						T								S	B				T	T			S	S			B							S			T	T	S	G	G	G	T	S				S	S								S
Template Predicted Secondary structure																	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	V	K	L	E	G	G	C	H	H	T	A	A	M	H	S	R	N	I	E	N	M	N	Q	M	A	N	A	I	D	T	S	I	F	V	K	N	G	P	C	I	A	G	L	G	L	G	G	E	G	W	T	T	M	T	I	T	T	P	T	G	E	G	V	T	S	A	R	T	F	V	R	L	R	R	C	V	L	V
Query Conservation
Alig confidence											.	.																																					.															.													.
Template Conservation											.	.																																					.															.													.
Template Sequence		F	C	N	D	S	I	Y	G	L	.	.	S	A	Y	V	H	T	Q	S	F	A	N	I	N	Q	A	I	S	D	L	E	V	G	E	V	Y	I	N	R	G	M	G	E	Q	H	Q	G	.	F	H	N	G	W	K	Q	S	G	F	G	G	E	D	.	G	K	F	G	L	E	Q	Y	L	E	K	K	.	T	V	Y	I
Template Known Secondary structure					S	S	S			S	.	.																					S	S					S			S				T	T	S	.		B					T	T			S		B	S	.							T	T					.
Template Predicted Secondary structure											.	.																																					.															.													.
Template SS confidence
		410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480		.	.	.	.
		462	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		485	.