Job Description P77445 Confidence 100.00% Date Thu Jan 5 12:29:23 GMT 2012 Rank 45 Aligned Residues 365 % Identity 16% Template c2h5gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase; PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase Resolution 2.25 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.														.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	D	A	V	A	A	A	K	V	A	Q	Q	G	L	K	.	.	S	V	A	M	R	Q	L	A	I	A	A	I	R	E	A	G	E	K	H	A	R	D	L	A	E	L	A	V	S	E	T	G	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	E	D	K	F	A	K	N	V	A	Q	A	R	G
Query Conservation																		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	Q	Q	G	E	X	A	R	S	G	G	R	X	L	A	T	L	E	P	E	Q	R	A	E	I	I	H	H	L	A	D	L	L	T	D	Q	R	D	E	I	L	L	A	N	K	K	D	L	E	E	A	E	G	R	L	A	A	P	L	L	K	R	L	S	L	S	T	S	K	L	N	S	L	A	I	G	L	R	Q
Template Known Secondary structure																			S																			T																T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		101	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		T	P	G	V	E	.	.	.	.	.	C	L	S	P	Q	V	L	T	G	D	N	G	L	T	L	I	E	N	A	P	W	G	V	V	A	S	V	T	P	S	T	N	P	A	A	T	V	I	N	N	A	I	S	L	I	A	A	G	N	S	V	I	F	A	P	H	P	A	A	K	K	V	S	Q	R	A	I	T	L	L
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																												.						.
Template Conservation																																							.						.
Template Sequence		I	A	A	S	S	Q	D	S	V	G	R	V	L	R	R	T	R	I	A	K	N	L	E	L	E	Q	V	T	V	P	I	G	V	L	L	V	I	.	F	E	S	R	P	.	D	C	L	P	Q	V	A	A	L	A	I	A	S	G	N	G	L	L	L	K	G	G	K	E	A	A	H	S	N	R	I	L	H	L	L	T
Template Known Secondary structure							T	T	S	T	T										T	T																	.		S	S		T	.	T													T									G	G	G
Template Predicted Secondary structure																																							.						.
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		N	Q	A	I	V	A	A	G	G	P	E	N	L	L	V	T	V	A	N	P	D	I	E	T	A	Q	R	L	F	K	F	P	G	I	G	L	L	V	V	T	G	G	E	A	V	V	E	A	A	R	K	H	T	N	.	K	R	L	I	A	A	G	A	G	N	P	P	V	V	V	D	E	T	A	D	L	A	R	A	A
Query Conservation																																																								.
Alig confidence												.											.	.	.	.	.	.	.	.																										.
Template Conservation												.											.	.	.	.	.	.	.	.
Template Sequence		Q	E	A	L	S	I	H	G	V	K	.	E	A	V	Q	L	V	N	T	R	E	.	.	.	.	.	.	.	.	E	V	K	X	I	D	L	I	I	P	R	G	S	S	Q	L	V	R	D	I	Q	K	A	A	K	G	I	P	V	X	G	H	S	E	G	I	C	H	X	Y	V	D	S	E	A	S	V	D	K	V	T
Template Known Secondary structure							T	T	T		G	.	G	G						T	T		.	.	.	.	.	.	.	.						S						S													S	S	S		B		S		S										T	T			T	T	T
Template Predicted Secondary structure												.											.	.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530		.	.	.	.	.	.	.	.	.	540									.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Q	S	I	V	K	G	A	S	F	D	N	N	I	I	C	A	D	E	K	V	L	I	V	V	D	S	V	A	D	E	L	M	.	R	L	M	E	G	Q	H	A	V	K	L	T	A	E	Q	A	Q	Q	L	Q	P	V	L	L	K	N	I	D	E	R	G	K	G	T	V	S	R	D	W	V	G	R	D	A	G	K	I
Query Conservation																																		.
Alig confidence										.																								.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	V	R	D	S	K	C	.	E	Y	P	A	A	C	N	A	L	E	T	L	L	I	H	R	D	L	L	R	T	P	L	F	D	Q	I	I	D	X	L	R	V	E	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										.	S		T	T	S	T	T	S								G	G	G	T	T	S													T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		599	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	I	G	L	K	V	P	Q	E	T	R	L	L	F	V	E	T	T	A	E	H	P	F	A	V	T	E	L	M	M	P	V	L	P	V	V	R	V	A	N	V	A	D	A	I	A	L	A	V	K	L	E	G	G	C	H	H	T	A	A	M	H	S	R	N	I	E	N	M	N	Q	M	A	N	A	I	D	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	H	A	G	P	K	F	A	S	K	S	L	R	T	E	Y	G	D	L	E	L	C	I	E	V	V	D	N	V	Q	D	A	I	D	H	I	H	K	Y	G	S	S	H	.	.	T	D	V	I	V	T	E	D	E	N	T	A	E	F	F	L	Q	H	V	D	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.													S	S					S	S								S	S														S	S	.	.							S														S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.
Template SS confidence
															643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.			.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.				.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		S	I	F	V	K	N	G	P	C	I	A	G	L	G	L	G	G	E	G	W	T	T	M	T	I	T	T	P	T	G	.	.	.	E	G	V	T	S	A	R	T	F	V	R	L	R	R	C	V	L	V	D	A
Query Conservation																																.	.	.
Alig confidence																.																.	.	.
Template Conservation																.
Template Sequence		A	C	V	F	W	N	A	S	T	R	F	S	D	G	.	Y	R	F	G	L	G	A	E	V	G	I	S	T	S	R	I	H	A	R	G	P	V	G	L	E	G	L	L	T	T	K	W	L	L	R	G	K	D
Template Known Secondary structure		S					S	S		G	G	G		S	T	.	T	T	T	T	S	S			S						S	S	S							G	G	G	G										S	S
Template Predicted Secondary structure																.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.