Job Description P25740 Confidence 100.00% Date Thu Jan 5 11:42:26 GMT 2012 Rank 4 Aligned Residues 371 % Identity 20% Template d2bisa1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Glycosyl transferases group 1 Resolution 2.8

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																							.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	F	P	.	.	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	F	E	L	I	Q	V	P	V
Query Conservation														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	V	L	L	L	G	F	E	F	L	P	V	K	V	G	G	L	A	E	A	L	T	A	I	S	E	A	L	A	S	L	G	H	E	V	L	V	F	T	P	S	H	G	R	F	Q	G	E	E	I	G	K	I	R	V	F	G	E	E	V	Q	V	K	V	S	Y	E	E	R	G	N	L	R	I	Y	R	I	G	G
Template Known Secondary structure									S			T	T			S	S	S															T	T										T	T	S	S											S	S	S												T	T								S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	H	T	N	H	G	R	N	A	E	Y	Y	A	W	V	Q	N	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	H	P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	L	D	S	E	D	V	Y	G	P	G	W	D	G	L	I	R	K	A	V	T	F	G	R	A	S	V	L	L	L	N	D	L	L	R	E	E	P	L	P	D	V	V	H	F	H	D	W	H	T	V	F	A	G	A	L	I	K	K	Y	F	K	I	P	A	V	F	T	I	H	R	L	N	K	S	K	L	P	A
Template Known Secondary structure		S	G	G	G		S		T	T		S																								T	T	S	S				S						T	G	G	G																				S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		121	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Query Sequence		Y	R	H	Y	A	A	F	E	.	.	.	.	.	.	.	.	.	.	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K	H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	.	.	.	.	S	R	E	I	Y
Query Conservation										.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.
Template Conservation
Template Sequence		F	Y	F	H	E	A	G	L	S	E	L	A	P	Y	P	D	I	D	P	E	H	T	G	G	Y	I	A	D	I	V	T	T	V	S	R	G	Y	L	I	D	E	W	G	F	F	R	N	F	E	G	K	I	T	Y	V	F	N	G	I	D	C	S	F	W	N	E	S	Y	L	T	G	S	R	D	E	R	K	K	S	L
Template Known Secondary structure							T	T		G	G	G			S	S												S	S					S								T					G	G	G	T	T	T										T	T	T	S		G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G	Q	D	K	P	R	K	F	E	A	L	A	.	.	.	.	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N
Query Conservation																																																														.	.	.	.
Alig confidence																																																														.	.	.	.
Template Conservation
Template Sequence		L	S	K	F	G	M	D	E	G	V	T	F	M	F	I	G	R	F	D	R	G	Q	K	G	V	D	V	L	L	K	A	I	E	I	L	S	S	K	K	E	F	Q	E	M	R	F	I	I	I	G	K	G	D	P	E	L	E	G	W	A	R	S	L	E	E	K	H	G	N	V	K	V	I	T	E	M	L	S	R	E
Template Known Secondary structure					T	T			S								S		B		S	S	S	S													T	T	S	G	G	G	G	G									B														T		T	T						S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A	A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A	H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	.	Q	S	P	L	R
Query Conservation																																																																												.
Alig confidence																																																				.						.																		.
Template Conservation																																																				.						.
Template Sequence		F	V	R	E	L	Y	G	S	V	D	F	V	I	I	P	S	Y	F	E	P	F	G	L	V	A	L	E	A	M	C	L	G	A	I	P	I	A	S	A	V	G	G	L	R	D	I	I	T	N	E	.	T	G	I	L	V	.	K	A	G	D	P	G	E	L	A	N	A	I	L	K	A	L	E	L	S	R	S	D	L
Template Known Secondary structure								T	T		S							S			S	S									T	T	T							S		T	T							T	T	.	T					.		T	T														T	T	T	T	S		T
Template Predicted Secondary structure																																																				.						.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I	T	G	G	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	F	R	E	N	C	K	K	R	A	M	S	F	S	W	E	K	S	A	E	R	Y	V	K	A	Y	T	G	S	I	D
Template Known Secondary structure															S															T		S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions