Job Description P25740 Confidence 99.66% Date Thu Jan 5 11:42:26 GMT 2012 Rank 42 Aligned Residues 338 % Identity 15% Template d1pn3a_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	I	V	A	F	C	L	Y	K	Y	F	P	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.
Template Sequence		M	R	V	L	I	T	G	.	.	.	C	G	S	R	G	D	T	E	P	L	V	A	L	A	A	R	L	R	E	L	G	A	D	A	R	M	C	L	P	P	D	Y	V	E	R	C	A	E	V	G	V	P	M	V	P	V	G	R	A	V	R	A	G	A	R	E	P	G	E	L	P	P	G	A	A	E	V	V	T	E
Template Known Secondary structure									.	.	.		S	S																	T	T									G	G	G								T							S	S		S	S	G	G	G	S		T	T				T	T		G	G	G
Template Predicted Secondary structure									.	.	.
Template SS confidence
		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
			65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	A	E	Y	Y	A	W	V	Q	N	H	L	K	E	H	P	A	D	R	V	V	G	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L
Query Conservation		.
Alig confidence		.																																																																									.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		V	V	A	E	W	F	D	K	V	P	A	A	I	E	G	C	D	A	V	V	T	T	G	L	L	P	A	A	V	A	V	R	S	M	A	E	K	L	G	I	P	Y	R	Y	T	V	L	S	P	D	H	L	P	S	E	Q	S	Q	A	E	R	D	M	Y	N	Q	G	A	D	R	L	F	G	.	.	.	.	.	.	.
Template Known Secondary structure															T	T		S																						T								S	S	G	G	G	S	G	G	G	S																T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	K	Q	I	A	D	F	Q	K	H	Y	Q	T	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	D	A	V	N	S	H	R	A	S	I	G	L	P	P	V	E	H	L	Y	D	Y	G	Y	T	D	Q	P	W	L	A	A	D	P	V	L	S	P	L	R	P	T	D	L	G	T	V	Q	T	G	A	W	I	L	P	D	E	R	P	L	S	A	E	L	E	A	F	L	A	A	G	S	T	P	V	Y	V	G	F
Template Known Secondary structure		.	.									T	T	S														S	S					S		T	T	T	S				T	T			S			B																				T	T	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V	V	G	Q	D	K	P	R	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	Y	Q	E	A
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		G	S	S	S	R	P	A	T	A	D	A	A	K	M	A	I	K	A	V	R	A	S	G	R	R	I	V	L	S	R	G	W	A	D	L	V	L	P	D	.	.	.	.	.	.	.	.	.	.	D	G	A	D	C	F	V	V	G	E	V	N	L	Q	E	L	F	G	R	V	A	A	A	I	.	.	.	.	H	H	D
Template Known Secondary structure		T	T			S	T																T	T								T	T	T	T				S	S	.	.	.	.	.	.	.	.	.	.			T	T					S	S								T	T	S	S				.	.	.	.			S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.											.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																			.
Query SS confidence																								.	.	.	.	.	.	.	.																			.
Query Sequence		A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	.	.	.	.	.	.	.	.	Y	A	H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	.	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D
Query Conservation																								.	.	.	.	.	.	.	.																			.
Alig confidence																								.	.	.	.	.	.	.	.																			.																	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		S	A	G	T	T	L	L	A	M	R	A	G	I	P	Q	I	V	V	R	R	V	V	D	N	V	V	E	Q	A	Y	H	A	D	R	V	A	E	L	G	V	G	V	A	V	D	G	P	V	P	T	I	D	S	L	S	A	A	L	D	T	A	L	A	P	E	.	.	.	.	.	I	R	A	R	A	T	T	V	A	D
Template Known Secondary structure													T								S	S			B	T	T	B												T	S							S	S														T	S	T	T	.	.	.	.	.									G	G
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.						360	.	.	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	D	L	Y	S	L	P	E	K	A	A	D	I	I	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	R	A	D	G	T	T	V	A	A	Q	L	L	F	D
Template Known Secondary structure		G	S		S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions