Job Description P25740 Confidence 99.97% Date Thu Jan 5 11:42:26 GMT 2012 Rank 24 Aligned Residues 309 % Identity 11% Template c3rhzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions Resolution 1.90 Å

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		1	.	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		M	I	V	A	F	C	.	L	Y	K	Y	F	P	F	G	G	L	Q	R	D	F	M	R	I	A	S	T	V	A	A	R	G	H	H	V	R	V	Y	T	Q	S	W	E	G	D	C	P	K	A	F	E	L	I	Q	V	P	V	K	S	H	T	N	H	G	R	N	A	E	Y	Y	A	W	V	Q	N	H	L	K	E	H
Query Conservation								.
Alig confidence								.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	Y	I	T	N	I	N	G	Q	S	I	Q	S	T	A	Q	L	C	Q	N	T	V	T	D	V	A	V	S	L	G	Y	R	E	L	G	I	Y	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Q	I	H	T	D	S	E	S	E	L	S	K	R	L	D	G	I	V	A	G	L
Template Known Secondary structure											S	S		T	T																	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	S													T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		P	A	D	R	V	V	G	.	.	.	.	.	.	F	N	K	M	P	G	L	D	V	Y	F	A	A	D	V	C	Y	A	E	K	V	A	Q	E	K	G	F	L	Y	R	L	T	S	R	Y	R	H	Y	A	A	F	E	R	A	T	F	E	Q	G	K	S	T	K	L	M	M	L	T	D	K	Q	I	A	D	F	Q	K
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		R	H	G	D	V	V	I	F	Q	T	P	T	W	N	T	T	E	F	D	E	K	L	M	N	K	L	K	L	Y	D	I	K	I	V	L	F	I	H	D	V	V	P	.	.	.	.	.	L	M	N	F	Y	L	M	D	R	T	I	A	Y	Y	N	K	A	D	V	V	V	A	P	S	Q	K	M	I	D	K	L	R	D
Template Known Secondary structure			T	T										S	S													T	T	S	S								S			G	G	.	.	.	.	.	G			G	G	G									T	T		S					S
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	Q	T	E	P	E	R	F	Q	I	L	P	P	G	I	Y	P	D	R	K	Y	S	E	Q	I	P	N	S	R	E	I	Y	R	Q	K	N	G	I	K	E	Q	Q	N	L	L	L	Q	V	G	S	D	F	G	R	K	G	V	D	R	S	I	E	A	L	A	S	L	P	E	S	L	R	H	N	T	L	L	F	V
Query Conservation
Alig confidence			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		F	.	G	M	N	V	S	K	T	V	V	Q	G	M	W	D	H	P	T	Q	A	P	M	F	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	E	I	H	F	P	G	N	P	E	R	F	S	F	V	K	E	W	K	Y	D	I	P	.	.	.	.	.	.	.	.	.	.	L	K	V	Y
Template Known Secondary structure		T	.	T				S							S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		T	T	T		G	G	G	G	G				S	S		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.																.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190											.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.								.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		V	G	Q	D	K	P	R	K	F	E	A	L	A	E	K	L	G	V	R	S	N	V	H	F	F	S	G	R	N	D	V	S	E	L	M	A	A	A	D	L	L	L	H	P	A	.	.	.	.	.	.	.	Y	Q	E	A	A	G	I	V	L	L	E	A	I	T	A	G	L	P	V	L	T	T	A	V	C	G	Y	A
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		T	W	Q	N	V	E	.	.	.	.	.	.	.	.	.	L	P	Q	N	V	H	K	I	N	Y	R	P	D	E	Q	L	L	M	E	M	S	Q	G	G	F	G	L	V	W	M	D	D	K	D	K	E	Y	Q	S	L	Y	C	S	Y	K	L	G	S	F	L	A	A	G	I	P	V	I	V	Q	E	G	I	A	N	Q
Template Known Secondary structure			S					.	.	.	.	.	.	.	.	.			T	T																	T	T	S	S								G	G	G					T	T	S												T							T	T		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.										.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		H	Y	I	A	D	A	N	C	G	T	V	I	A	E	P	F	S	Q	E	Q	L	N	E	V	L	R	K	A	L	T	Q	S	P	L	R	M	A	W	A	E	N	A	R	H	Y	A	D	T	Q	D	L	Y	S	L	P	E	K	A	A	.	D	I	I	T	G	G	L
Query Conservation																																																													.
Alig confidence														.	.	.														.	.																														.
Template Conservation														.	.	.														.	.
Template Sequence		E	L	I	E	N	N	G	L	G	W	I	V	.	.	.	K	D	V	E	E	A	I	M	K	V	K	N	V	.	.	N	E	D	E	Y	I	E	L	V	K	N	V	R	S	F	N	P	I	L	R	K	G	F	F	T	R	R	L	L	T	E	S	V	F	Q	A	I
Template Known Secondary structure							T	T						.	.	.	S	S												.	.																T					T	T
Template Predicted Secondary structure														.	.	.														.	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions